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  1. IGB
  2. IGBF-3315

Improve BED file representing annotations for the T-DNA construct used to create F3H-OX3

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        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
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          Description

          Suggestions for improvement - to make the image look nicer:
          Pick some pretty colors to distinguish protein-coding genes (e.g., KanR, F3H) from the other features. Currently, all the features have the same color (RGB code 0,0,255). If you do that, then we can make a very nice visualization by turning on the "Color by RGB" feature in the track.
          Copy the values from field 14 into field 13.
          You can curate field 14 a bit more, by judiciously copying over some of the text annotations from each feature in the original GenBank file.

          Find the bed file in bitbucket: https://bitbucket.org/hotpollen/flavonoid-rnaseq/src/main/ExternalDataSets/pK7WG2-F3H-OX3.bed

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              Task - A task that needs to be done. IGBF-3327 Improve BED file again representing annotations for the T-DNA construct used to create F3H-OX3

              • Major - Major loss of function.
              • Closed

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                  • Assignee:
                    Mdavis4290 Molly Davis
                    Reporter:
                    Mdavis4290 Molly Davis
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