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  1. IGB
  2. IGBF-3323

Generate scaled coverage graphs Kelsey's Palanivelu Lab 2023

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
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          Description

          RR has downloaded the data onto the UNCC cluster and saved it here: /projects/tomato_genome/rnaseq/30-804059537-kelsie.
          Please do the data processing in this directory:
          /nobackup/tomato_genome/30-804059537-KP (kp for "Kelsey Pryze")
          Bitbucket repo: https://bitbucket.org/hotpollen/pistil-rna-seq

          Already ran pipeline IGBF-3251.

          Next Steps:

          • Generate scaled coverage graphs (Molly)

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3325 Copy KP 2023 data (30-804059537) to IGB Quickload host for visualization in IGB

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3326 Create KP 2023 sample sheet needed for Quickload site and more

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3324 Generate junction files Kelsey's Palanivelu Lab 2023

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    Mdavis4290 Molly Davis
                    Reporter:
                    Mdavis4290 Molly Davis
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                    Dates

                    • Created:
                      Updated:
                      Resolved: