Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Summer 2 2023 May 29, Summer 3 2023 June 12, Summer 4 2023 June 26, Summer 5 2023 July 10
Description
For this task, create a new Markdown named FindControlVsStressDEGenes-DESeq.Rmd
The goal of this new Markdown is to compare treatment versus control samples for each genotype and each treatment duration.
The Markdown will mirror FindControlVsStressDEGenes-edgeR.Rmd, saved in the same location of the repository.
Both files will reside in the same folder. Also, both will output results files with the same format. The goal of doing this is to compare the DE genes found by each library.
Also, the DeSeq Markdown will include volcano plots to summarize results.