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  1. IGB
  2. IGBF-3377

Make 2021 Palanivelu to sample sheet

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Original Directory: Directory: /projects/tomato_genome/rnaseq/ravi-tamaulipas
          Nf-core run: /nobackup/tomato_genome/Ravi_tamaulipas_2021

          Notes:
          Study_name column: for the 2021 /projects/tomato_genome/rnaseq/ravi-tamaulipas data, study could be: "Tamaulipas [tissue type] RP Lab"

          Make sure to review 'Tamaulipas-pistils-3hr-25C-R2' & 'Tamaulipas-pistils-0hr-25C-R2' for SL4 in IGB.

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              is blocked by

              Task - A task that needs to be done. IGBF-3376 Create scaled and junction files for 2021 Palanivelu Lab-generated samples

              • Major - Major loss of function.
              • Closed
              relates to

              Task - A task that needs to be done. IGBF-3375 Run Nextflow with 2021 Palanivelu Lab-generated samples

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3389 Edit XML script to include SL4, SL5 tomato genomes

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    Mdavis4290 Molly Davis
                    Reporter:
                    Mdavis4290 Molly Davis
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                    Dates

                    • Created:
                      Updated:
                      Resolved: