Details
-
Type:
Task
-
Status: Closed (View Workflow)
-
Priority:
Major
-
Resolution: Done
-
Affects Version/s: None
-
Fix Version/s: None
-
Labels:None
-
Story Points:0.5
-
Epic Link:
-
Sprint:Summer 7 2023 Aug 7, Summer 8 2023 Aug 21
Description
File: muday-144-SL5_counts-salmon.txt
Request email:
Also, we have a small problem with the excel files on the DE genes within genotype and between treatments, that I think you can help us with easily.
We are trying to run an enrichment analysis and the software does not recognize the newest V5 genome. You gave us the S4 IDs, but they are part of the description, rather than a separate column. Is there a way to add this to the spreadsheet as a column? That way we can cut and paste a group without manually extracting each gene ID from that text heavy gene description list.
Thanks
Gloria
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link |
|
| Attachment | SL4_SL5_Description.R [ 17930 ] |
| Attachment | SL4_SL5_description_tomato.csv [ 17931 ] |
| Attachment | SL4_SL5_counts_muday-144.csv [ 17932 ] |
| Summary | Separate SL4 names from the description column to their own column | Separate SL4 names from the description column to a new column |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Molly Davis [ molly ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Assignee | Molly Davis [ molly ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Sprint | Summer 7 2023 Aug 7 [ 176 ] | Summer 7 2023 Aug 7, Summer 8 2023 Aug 21 [ 176, 177 ] |
| Rank | Ranked higher |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |