Details
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Type:
Task
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Status: To-Do (View Workflow)
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Priority:
Major
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Resolution: Unresolved
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:4
Description
Situation: When running the FindJunctions program, if a read runs past the end of the specified chromosome length an error is thrown that stops the processing of the rest of the file.
Task: Modify the FindJunctions program so that if a "Position is too high" error is thrown it is caught and reported and then the program continues to proceed instead of exiting.
FindJunctions repository: https://bitbucket.org/lorainelab/findjunctions/src/master/
Attachments
Issue Links
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- Closed
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Activity
| Attachment | SL40ch10_64782127_64792705.bam.bai [ 17958 ] |
| Attachment | SL40ch10_64782127_64792705.bam [ 17959 ] |
| Description |
Situation: When running the FindJunctions program, if a read runs past the end of the specified chromosome length an error is thrown that stops the processing of the rest of the file. See Task: Modify the FindJunctions program so that if a "Position is too high" error is thrown it is caught and reported and then the program continues to proceed instead of exiting. FindJunctions repository: https://bitbucket.org/lorainelab/findjunctions/src/master/ |
Situation: When running the FindJunctions program, if a read runs past the end of the specified chromosome length an error is thrown that stops the processing of the rest of the file.
Task: Modify the FindJunctions program so that if a "Position is too high" error is thrown it is caught and reported and then the program continues to proceed instead of exiting. FindJunctions repository: https://bitbucket.org/lorainelab/findjunctions/src/master/ |