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  1. IGB
  2. IGBF-3466

Add SL4 and SL5 salmon.merged.gene_counts.tsv for 30-605730043 to repository

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Repository pistil-rna-seq lacks "counts" files for data set 30-605730043 even though multiqc_report and _samples.csv files are present.

      For this task, add these two files to pistil-rna-seq/ExternalData:

      • 30-605730043_SL4_salmon.merged.gene_counts.tsv
      • 30-605730043_SL5_salmon.merged.gene_counts.tsv

      using naming convention:

      [data set]_[assembly]_salmon.merged.gene_counts.tsv

        Attachments

          Activity

          ann.loraine Ann Loraine created issue -
          ann.loraine Ann Loraine made changes -
          Field Original Value New Value
          Epic Link IGBF-3251 [ 22132 ]
          Mdavis4290 Molly Davis made changes -
          Status To-Do [ 10305 ] In Progress [ 3 ]
          Mdavis4290 Molly Davis made changes -
          Assignee Molly Davis [ molly ]
          Mdavis4290 Molly Davis made changes -
          Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
          Mdavis4290 Molly Davis made changes -
          Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
          Mdavis4290 Molly Davis made changes -
          Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
          Mdavis4290 Molly Davis made changes -
          Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
          Mdavis4290 Molly Davis made changes -
          Assignee Ann Loraine [ aloraine ]
          ann.loraine Ann Loraine made changes -
          Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
          ann.loraine Ann Loraine made changes -
          Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
          ann.loraine Ann Loraine made changes -
          Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
          ann.loraine Ann Loraine made changes -
          Resolution Done [ 10000 ]
          Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
          ann.loraine Ann Loraine made changes -
          Assignee Ann Loraine [ aloraine ] Molly Davis [ molly ]
          ann.loraine Ann Loraine made changes -
          Story Points 0.5 0.25

            People

            • Assignee:
              Mdavis4290 Molly Davis
              Reporter:
              ann.loraine Ann Loraine
            • Votes:
              0 Vote for this issue
              Watchers:
              2 Start watching this issue

              Dates

              • Created:
                Updated:
                Resolved: