Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3477

EBSEQ: The bigger table version

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          The goal is to add to the existing EB-SEQ table results (From IBGF-3454).

          The table currently includes the EB-SEQ results along with the SolyID and gene description.

          What we can add:

          • The read expression counts data from Salmon.
          • The deseq2 results, values, log fold changes, pvalues, etc.
          • EdgeR data

          This would produce an unwieldy table, 100's of columns long!
          I am going to first touch base with Gloria about what would be the most useful.

            Attachments

              Issue Links

              is blocked by

              Task - A task that needs to be done. IGBF-3489 Tweaking the EBSEQ to merge results into a master table

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

                Activity

                  People

                  • Assignee:
                    robofjoy Robert Reid
                    Reporter:
                    robofjoy Robert Reid
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    1 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: