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  1. IGB
  2. IGBF-3514

Investigate errors in IGB when View in IGB is invoked

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      When the View in IGB in Bioviz Connect is clicked on IGB loads the file the first time but when View in IGB in another file is clicked it throws the following error:

      java.lang.NullPointerException: Cannot invoke "java.util.Optional.ifPresent(java.util.function.Consumer)" because the return value of "com.affymetrix.igb.view.load.GeneralLoadUtils.getDataSet(java.net.URI, java.util.Optional, String, String, com.affymetrix.genometry.GenomeVersion, boolean)" is null
      	at com.affymetrix.igb.view.load.GeneralLoadUtils.openURI(GeneralLoadUtils.java:967)
      	at com.affymetrix.igb.IgbServiceImpl.openURI(IgbServiceImpl.java:363)
      	at com.affymetrix.igb.bookmarks.BookmarkUnibrowControlServlet.directlyLoadFile(BookmarkUnibrowControlServlet.java:589)
      	at com.affymetrix.igb.bookmarks.BookmarkUnibrowControlServlet.lambda$directlyLoadUrls$8(BookmarkUnibrowControlServlet.java:578)
      	at java.base/java.util.HashMap.forEach(HashMap.java:1429)
      	at com.affymetrix.igb.bookmarks.BookmarkUnibrowControlServlet.directlyLoadUrls(BookmarkUnibrowControlServlet.java:577)
      	at com.affymetrix.igb.bookmarks.BookmarkUnibrowControlServlet$1.runInBackground(BookmarkUnibrowControlServlet.java:247)
      	at com.affymetrix.genometry.thread.CThreadWorker.doInBackground(CThreadWorker.java:73)
      	at java.desktop/javax.swing.SwingWorker$1.call(SwingWorker.java:305)
      	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:317)
      	at java.desktop/javax.swing.SwingWorker.run(SwingWorker.java:342)
      	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144)
      	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642)
      	at java.base/java.lang.Thread.run(Thread.java:1583)
      
      

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              • Assignee:
                karthik Karthik Raveendran
                Reporter:
                karthik Karthik Raveendran
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                Dates

                • Created:
                  Updated:
                  Resolved: