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  1. IGB
  2. IGBF-3535

Update SRA with new sample titles

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Minor
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          In the manuscript revisions, Anthony updated OX3 with a new ID VF36-T3.

          SO I NEED to go into SRA and make changes accordingly. The SRP number for this submission is SRP460750.

          I started this last week. I made a change to the metasheet and clicked ok.
          Still have more to change on the metasheet.

          HOWEVER,

          As soon as you make a change, it goes into SRA review process! And no other changes are allowed during this process!! So now I wait for them to review and give me the OK.

          The moral of the story is
          Make all of the changes and THEN click submit.

          This will remain in todo, until SRA gives the go ahead.

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              robofjoy Robert Reid added a comment -

              SRA has given me the go ahead.

              Making the changes now.

              The metadata is getting changed for OX3.

              OF3 becomes VF36-T3

              Show
              robofjoy Robert Reid added a comment - SRA has given me the go ahead. Making the changes now. The metadata is getting changed for OX3. OF3 becomes VF36-T3
              Hide
              Permalink
              robofjoy Robert Reid added a comment -

              The new table looks like this:

              F.28.30.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 30 minutes, replicate 7
              F.28.15.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 15 minutes, replicate 9
              V.28.30.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 30 minutes, replicate 7
              V.34.75.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 75 minutes, replicate 7
              F.28.30.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 30 minutes, replicate 9
              F.28.15.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 15 minutes, replicate 8
              V.28.45.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 45 minutes, replicate 7
              F.34.15.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 15 minutes, replicate 7
              V.34.45.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 45 minutes, replicate 7
              V.34.30.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 30 minutes, replicate 7
              V.28.75.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 75 minutes, replicate 7
              F.28.15.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 15 minutes, replicate 7
              V.28.15.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 15 minutes, replicate 7
              A.34.30.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 30 minutes, replicate 9
              V.34.45.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 45 minutes, replicate 9
              V.28.30.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 30 minutes, replicate 8
              F.34.75.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 75 minutes, replicate 8
              F.34.75.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 75 minutes, replicate 9
              F.28.45.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 45 minutes, replicate 9
              F.28.45.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 45 minutes, replicate 8
              F.34.30.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 30 minutes, replicate 9
              F.34.15.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 15 minutes, replicate 9
              A.34.45.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 45 minutes, replicate 7
              A.34.45.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 45 minutes, replicate 9
              A.28.30.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are)pollen tube at 28C, 30 minutes, replicate 9
              V.34.75.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 75 minutes, replicate 9
              V.28.45.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 45 minutes, replicate 9
              A.28.30.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 30 minutes, replicate 8
              F.28.45.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 45 minutes, replicate 7
              V.34.15.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 15 minutes, replicate 8
              F.28.75.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 75 minutes, replicate 8
              F.34.30.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 30 minutes, replicate 7
              F.34.30.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 30 minutes, replicate 8
              A.28.45.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 45 minutes, replicate 7
              F.28.75.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 75 minutes, replicate 7
              V.34.30.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 30 minutes, replicate 9
              F.34.45.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 45 minutes, replicate 9
              F.28.30.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 30 minutes, replicate 8
              A.34.75.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 75 minutes, replicate 7
              F.34.45.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 45 minutes, replicate 7
              A.34.75.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 75 minutes, replicate 8
              A.28.75.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 75 minutes, replicate 7
              A.34.30.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 30 minutes, replicate 8
              V.34.75.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 75 minutes, replicate 8
              V.28.30.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 30 minutes, replicate 9
              V.28.15.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 15 minutes, replicate 8
              A.28.45.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are)pollen tube at 28C, 45 minutes, replicate 8
              F.34.15.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 15 minutes, replicate 8
              A.28.15.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 15 minutes, replicate 9
              A.28.45.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 45 minutes, replicate 9
              A.28.30.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 30 minutes, replicate 7
              V.34.15.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 15 minutes, replicate 9
              A.34.15.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 15 minutes, replicate 7
              A.28.75.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 75 minutes, replicate 9
              F.28.75.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 75 minutes, replicate 9
              A.28.75.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 75 minutes, replicate 8
              V.28.75.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 75 minutes, replicate 9
              F.34.75.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 75 minutes, replicate 7
              A.34.15.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 15 minutes, replicate 9
              V.28.15.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 15 minutes, replicate 9
              A.34.45.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 45 minutes, replicate 8
              F.34.45.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 45 minutes, replicate 8
              A.34.30.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 30 minutes, replicate 7
              V.34.30.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 30 minutes, replicate 8
              A.34.15.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 15 minutes, replicate 8
              V.34.45.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 45 minutes, replicate 8
              A.28.15.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 15 minutes, replicate 8
              V.28.75.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 75 minutes, replicate 8
              A.34.75.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 75 minutes, replicate 9
              A.28.15.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 15 minutes, replicate 7
              V.28.45.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 45 minutes, replicate 8
              V.34.15.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 15 minutes, replicate 7

              Show
              robofjoy Robert Reid added a comment - The new table looks like this: F.28.30.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 30 minutes, replicate 7 F.28.15.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 15 minutes, replicate 9 V.28.30.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 30 minutes, replicate 7 V.34.75.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 75 minutes, replicate 7 F.28.30.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 30 minutes, replicate 9 F.28.15.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 15 minutes, replicate 8 V.28.45.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 45 minutes, replicate 7 F.34.15.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 15 minutes, replicate 7 V.34.45.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 45 minutes, replicate 7 V.34.30.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 30 minutes, replicate 7 V.28.75.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 75 minutes, replicate 7 F.28.15.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 15 minutes, replicate 7 V.28.15.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 15 minutes, replicate 7 A.34.30.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 30 minutes, replicate 9 V.34.45.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 45 minutes, replicate 9 V.28.30.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 30 minutes, replicate 8 F.34.75.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 75 minutes, replicate 8 F.34.75.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 75 minutes, replicate 9 F.28.45.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 45 minutes, replicate 9 F.28.45.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 45 minutes, replicate 8 F.34.30.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 30 minutes, replicate 9 F.34.15.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 15 minutes, replicate 9 A.34.45.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 45 minutes, replicate 7 A.34.45.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 45 minutes, replicate 9 A.28.30.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are)pollen tube at 28C, 30 minutes, replicate 9 V.34.75.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 75 minutes, replicate 9 V.28.45.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 45 minutes, replicate 9 A.28.30.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 30 minutes, replicate 8 F.28.45.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 45 minutes, replicate 7 V.34.15.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 15 minutes, replicate 8 F.28.75.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 75 minutes, replicate 8 F.34.30.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 30 minutes, replicate 7 F.34.30.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 30 minutes, replicate 8 A.28.45.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 45 minutes, replicate 7 F.28.75.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 75 minutes, replicate 7 V.34.30.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 30 minutes, replicate 9 F.34.45.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 45 minutes, replicate 9 F.28.30.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 30 minutes, replicate 8 A.34.75.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 75 minutes, replicate 7 F.34.45.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 45 minutes, replicate 7 A.34.75.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 75 minutes, replicate 8 A.28.75.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 75 minutes, replicate 7 A.34.30.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 30 minutes, replicate 8 V.34.75.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 75 minutes, replicate 8 V.28.30.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 30 minutes, replicate 9 V.28.15.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 15 minutes, replicate 8 A.28.45.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are)pollen tube at 28C, 45 minutes, replicate 8 F.34.15.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 15 minutes, replicate 8 A.28.15.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 15 minutes, replicate 9 A.28.45.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 45 minutes, replicate 9 A.28.30.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 30 minutes, replicate 7 V.34.15.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 15 minutes, replicate 9 A.34.15.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 15 minutes, replicate 7 A.28.75.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 75 minutes, replicate 9 F.28.75.9 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 28C, 75 minutes, replicate 9 A.28.75.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 75 minutes, replicate 8 V.28.75.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 75 minutes, replicate 9 F.34.75.7 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 75 minutes, replicate 7 A.34.15.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 15 minutes, replicate 9 V.28.15.9 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 15 minutes, replicate 9 A.34.45.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 45 minutes, replicate 8 F.34.45.8 RNA-Seq of Solanum lycopersicum:VF36-T3 pollen tube at 34C, 45 minutes, replicate 8 A.34.30.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 30 minutes, replicate 7 V.34.30.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 30 minutes, replicate 8 A.34.15.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 15 minutes, replicate 8 V.34.45.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 45 minutes, replicate 8 A.28.15.8 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 15 minutes, replicate 8 V.28.75.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 75 minutes, replicate 8 A.34.75.9 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 34C, 75 minutes, replicate 9 A.28.15.7 RNA-Seq of Solanum lycopersicum:anthocyanin reduced (are) pollen tube at 28C, 15 minutes, replicate 7 V.28.45.8 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 28C, 45 minutes, replicate 8 V.34.15.7 RNA-Seq of Solanum lycopersicum:VF36 pollen tube at 34C, 15 minutes, replicate 7
              Hide
              Permalink
              robofjoy Robert Reid added a comment -

              I have taken a look through the SRA results in the NCBI submission portal.

              https://dataview.ncbi.nlm.nih.gov/objects?linked_to_id=PRJNA1017816&archive=sra

              And they now appear correct as Gloria requested.

              Case closed!

              Show
              robofjoy Robert Reid added a comment - I have taken a look through the SRA results in the NCBI submission portal. https://dataview.ncbi.nlm.nih.gov/objects?linked_to_id=PRJNA1017816&archive=sra And they now appear correct as Gloria requested. Case closed!

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                  robofjoy Robert Reid
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                  robofjoy Robert Reid
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