[IGBF-3551] Add ProtAnnot icon to IGB - JIRA UNCC

Details

Type: Task
Status: Closed (View Workflow)
Priority: Minor
Resolution: Done
Affects Version/s: None
Fix Version/s: None
Labels:
- ProtAnnot
- beginner

Story Points:
0.25
Epic Link:
Improve IGB for users
Sprint:
Spring 4, Spring 5

Description

The ProtAnnot icon that is currently being used in the IGB App Manager should be added to the options that pop up for a user when they right click on a gene annotation (i.e., the context menu). The "BLASTX nr protein database" option in that same menu currently has a double helix icon next to it in that same menu, for example.

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Attachments

org.lorainelab.igb.protannot-logo.png
17 kB
22/Jan/24 2:06 PM

Issue Links

relates to

IGBF-3661 Add ProtAnnot icon to context menu that appears right-click gene models

Closed

Activity

Ascending order - Click to sort in descending order

Paige Kulzer created issue - 22/Jan/24 12:03 PM

Paige Kulzer made changes - 22/Jan/24 12:03 PM

Field	Original Value	New Value
Epic Link		IGBF-1765 [ 17855 ]

Nowlan Freese made changes - 22/Jan/24 2:06 PM

Attachment

org.lorainelab.igb.protannot-logo.png [ 18178 ]

Nowlan Freese made changes - 23/Jan/24 10:37 AM

Labels

ProtAnnot

ProtAnnot beginner

Nowlan Freese made changes - 24/Jan/24 10:11 AM

Sprint

Spring 2 [ 186 ]

Spring 3 [ 187 ]

Nowlan Freese made changes - 07/Feb/24 11:50 AM

Assignee

Kaushik Gopu [ kgopu ]

Nowlan Freese made changes - 16/Feb/24 2:34 PM

Sprint

Spring 3 [ 187 ]

Spring 4 [ 188 ]

Nowlan Freese made changes - 21/Feb/24 10:35 AM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

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Kaushik Gopu added a comment - 21/Feb/24 2:51 PM - edited

Added icon to the IGB menu item.
To test, fetch and checkout to this branch.

Test Instructions:

run
```
mvn clean install
```

Open IGB, go to App Manager -> Manage Repositories -> Add, in the URL field add path to the target folder.
Start ProtAnnot with an icon appears on IGB tools.

Show

Kaushik Gopu added a comment - 21/Feb/24 2:51 PM - edited Added icon to the IGB menu item. To test, fetch and checkout to this branch . Test Instructions: run mvn clean install Open IGB, go to App Manager -> Manage Repositories -> Add, in the URL field add path to the target folder. Start ProtAnnot with an icon appears on IGB tools.

Kaushik Gopu made changes - 21/Feb/24 2:53 PM

Status

In Progress [ 3 ]

Needs 1st Level Review [ 10005 ]

Nowlan Freese made changes - 22/Feb/24 9:36 AM

Assignee

Kaushik Gopu [ kgopu ]

Nowlan Freese made changes - 26/Feb/24 10:30 AM

Assignee

Paige Kulzer [ pkulzer ]

Nowlan Freese made changes - 26/Feb/24 10:30 AM

Status

Needs 1st Level Review [ 10005 ]

First Level Review in Progress [ 10301 ]

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Paige Kulzer added a comment - 26/Feb/24 10:33 AM

Tested with Dr. Freese, the ProtAnnot icon appears in IGB now and the code changes look good. Ready for pull request.

Show

Paige Kulzer added a comment - 26/Feb/24 10:33 AM Tested with Dr. Freese, the ProtAnnot icon appears in IGB now and the code changes look good. Ready for pull request.

Paige Kulzer made changes - 26/Feb/24 10:33 AM

Status

First Level Review in Progress [ 10301 ]

Ready for Pull Request [ 10304 ]

Paige Kulzer made changes - 26/Feb/24 10:35 AM

Assignee

Paige Kulzer [ pkulzer ]

Kaushik Gopu [ kgopu ]

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Kaushik Gopu added a comment - 26/Feb/24 2:33 PM

PR has been submitted to the IGB_10_Alignment branch.

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Kaushik Gopu added a comment - 26/Feb/24 2:33 PM PR has been submitted to the IGB_10_Alignment branch.

Kaushik Gopu made changes - 26/Feb/24 2:34 PM

Assignee

Kaushik Gopu [ kgopu ]

Ann Loraine [ aloraine ]

Paige Kulzer made changes - 26/Feb/24 4:18 PM

Status

Ready for Pull Request [ 10304 ]

Pull Request Submitted [ 10101 ]

Ann Loraine made changes - 27/Feb/24 4:08 PM

Status

Pull Request Submitted [ 10101 ]

Reviewing Pull Request [ 10303 ]

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Ann Loraine added a comment - 27/Feb/24 4:08 PM

PR is merged.

Show

Ann Loraine added a comment - 27/Feb/24 4:08 PM PR is merged.

Nowlan Freese made changes - 28/Feb/24 10:37 AM

Status

Reviewing Pull Request [ 10303 ]

Merged Needs Testing [ 10002 ]

Nowlan Freese made changes - 28/Feb/24 10:37 AM

Assignee

Ann Loraine [ aloraine ]

Ann Loraine made changes - 04/Mar/24 9:41 AM

Sprint

Spring 4 [ 188 ]

Spring 4, Spring 5 [ 188, 189 ]

Ann Loraine made changes - 04/Mar/24 9:41 AM

Rank

Ranked higher

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Nowlan Freese added a comment - 12/Mar/24 3:05 PM

Tested on Mac, Windows, Linux using the repo: https://bitbucket.org/lorainelab/protannot/downloads/

Icon appears in Tools menu.

Closing ticket.

Show

Nowlan Freese added a comment - 12/Mar/24 3:05 PM Tested on Mac, Windows, Linux using the repo: https://bitbucket.org/lorainelab/protannot/downloads/ Icon appears in Tools menu. Closing ticket.

Nowlan Freese made changes - 12/Mar/24 3:05 PM

Assignee

Kaushik Gopu [ kgopu ]

Nowlan Freese made changes - 12/Mar/24 3:05 PM

Status

Merged Needs Testing [ 10002 ]

Post-merge Testing In Progress [ 10003 ]

Nowlan Freese made changes - 12/Mar/24 3:05 PM

Resolution		Done [ 10000 ]
Status	Post-merge Testing In Progress [ 10003 ]	Closed [ 6 ]

Nowlan Freese made changes - 20/Mar/24 9:30 AM

Link

This issue relates to ~~IGBF-3661~~ [ ~~IGBF-3661~~ ]

People

Assignee:

Kaushik Gopu

Reporter:

Paige Kulzer

Votes:

0 Vote for this issue

Watchers:

4 Start watching this issue

Dates

Created:

22/Jan/24 12:03 PM

Updated:

20/Mar/24 9:30 AM

Resolved:

12/Mar/24 3:05 PM