Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Minor
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 10.1.0
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Labels:None
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Story Points:1
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Epic Link:
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Sprint:Spring 4, Spring 9, Spring 10
Description
Situation - While testing IGBF-3528 we discovered that when the same UCSC REST or UCSC DAS track (for example, refGene) was loaded in two different genomes, the track would disappear.
Task: Investigate this issue and propose a fix if possible.
Note: This issue appears in 9.1.10 when loading UCSC DAS data as well as with the recent implementation of UCSC REST.
To reproduce the issue:
- Select the mouse genome.
- Select Available Data > UCSC (DAS) > refGene
- Click Load Data
- Change to the human genome.
- Select Available Data > UCSC (DAS) > refGene
- Click Load Data
- Go back to the mouse genome
- The refGene added from UCSC should be missing from the Data Management Table. The data should still be present as a track, but grayed out as if it had not been loaded.
Attachments
Issue Links
- relates to
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IGBF-3528 Implement logic to load data for genePred file type
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- Closed
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link |
|
| Sprint | Spring 3 [ 187 ] | Spring 4 [ 188 ] |
| Sprint | Spring 4 [ 188 ] | Spring 4, Spring 5 [ 188, 189 ] |
| Rank | Ranked higher |
| Sprint | Spring 4, Spring 5 [ 188, 189 ] | Spring 4, Spring 6 [ 188, 190 ] |
| Story Points | 2 | 1 |
| Sprint | Spring 4, Spring 6 [ 188, 190 ] | Spring 4, Spring 7 [ 188, 191 ] |
| Sprint | Spring 4, Spring 7 [ 188, 191 ] | Spring 4, Spring 8 [ 188, 192 ] |
| Sprint | Spring 4, Spring 8 [ 188, 192 ] | Spring 4, Spring 9 [ 188, 193 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Attachment | Screenshot 2024-05-08 at 2.32.53 PM.png [ 18368 ] |
| Attachment | Screenshot 2024-05-08 at 2.33.14 PM.png [ 18369 ] |
| Attachment | Screenshot 2024-05-08 at 2.35.57 PM.png [ 18370 ] |
| Attachment | Screenshot 2024-05-08 at 2.36.28 PM.png [ 18371 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Sprint | Spring 4, Spring 9 [ 188, 193 ] | Spring 4, Spring 9, Spring 10 [ 188, 193, 194 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Summary | Investigate UCSC data tracks disappearing | Fix UCSC data tracks disappearing |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Assignee | Ann Loraine [ aloraine ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Assignee | Ann Loraine [ aloraine ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Assignee | Jaya Sravani Sirigineedi [ jsirigin ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Fix Version/s | 10.1.0 [ 11000 ] |