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  1. IGB
  2. IGBF-3633

Load UCSC REST data by default

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: 10.1.0
        • Labels:
          None

          Description

          Situation: When a user selects a genome in IGB the default gene annotation (usually RefGene) for that genome is loaded automatically (Load Mode = Genome). With the addition of new genomes from UCSC REST endpoint that are not part of IGB Quickload, it would be nice for users if we would load a gene annotation automatically.

          Task: Investigate if we can check to see if a genome version is not being provided by IGB Quickload. If it is not, but the UCSC REST genome annotation is available (RefGene, for example), load the UCSC REST annotation.

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              relates to

              Task - A task that needs to be done. IGBF-3920 Load UCSC REST RefSeq All data by default if RefGene is not present

              • Major - Major loss of function.
              • Closed

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                  People

                  • Assignee:
                    jsirigin Jaya Sravani Sirigineedi (Inactive)
                    Reporter:
                    nfreese Nowlan Freese
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                    Dates

                    • Created:
                      Updated:
                      Resolved: