Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Trivial
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:3
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Epic Link:
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Sprint:Spring 6, Spring 7, Spring 8, Spring 9, Spring 10
Description
GOAL: to set up a script to run Trinity on Kelsey data.
Eventually get this script integrated into bitbucket for future purposes.
This dataset could then be aligned as contigs to SL4 and SL5.
This dataset could also be fed into IGB as a "reference" and we can look at how the raw sequences align the newly created contigs.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2993 [ 21429 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Description |
GOAL: to set up a script to run Trinity on Kelsey data. Eventually get this script integrated into bitbucket for future purposes. This dataset could then be aligned as contigs to SL4 and SL5. This dataset could also be fed into IGB as a "reference" and we can look at how the raw sequences align the newly created contigs. |
GOAL: to set up a script to run Trinity on Kelsey data.
Eventually get this script integrated into bitbucket for future purposes. This dataset could then be aligned as contigs to SL4 and SL5. This dataset could also be fed into IGB as a "reference" and we can look at how the raw sequences align the newly created contigs. |
| Sprint | Spring 6 [ 190 ] |
| Sprint | Spring 6 [ 190 ] | Spring 6, Spring 7 [ 190, 191 ] |
| Rank | Ranked higher |
| Sprint | Spring 6, Spring 7 [ 190, 191 ] | Spring 6, Spring 7, Spring 8 [ 190, 191, 192 ] |
| Rank | Ranked higher |
| Sprint | Spring 6, Spring 7, Spring 8 [ 190, 191, 192 ] | Spring 6, Spring 7, Spring 8, Spring 9 [ 190, 191, 192, 193 ] |
| Rank | Ranked higher |
| Sprint | Spring 6, Spring 7, Spring 8, Spring 9 [ 190, 191, 192, 193 ] | Spring 6, Spring 7, Spring 8, Spring 9, Spring 10 [ 190, 191, 192, 193, 194 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |