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  1. IGB
  2. IGBF-3680

Improve documentation: Explain how our FindJunctions is different from Top Hat find junctions feature

        Details

        • Type: Documentation
        • Status: Closed (View Workflow)
        • Priority: Minor
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          There's currently no form of documentation in the User's Guide that I can find explaining the difference between FindJunctions (Top Hat) and Find Junctions. The only mention I can find of the former in the User's Guide is here in the IGB Gallery.

          Task: Investigate the difference between FindJunctions (Top Hat) and Find Junctions and report your findings on this ticket. Then, create a new ticket to do the following:

          • Either update the FindJunctions page of the User's Guide, or
          • Create a new page in the User's Guide detailing FindJunctions (Top Hat) and how to use it in IGB.

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3738 Update find junctions repo even more - main branch, bitbucket pipeline, more readme text

              • Major - Major loss of function.
              • Closed

              Documentation - When documentation is missing or wrong IGBF-1088 Update FindJunctions page in User's Guide

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

              Documentation - When documentation is missing or wrong IGBF-3679 Document instructions for compiling FindJunctions via Bitbucket

              • Minor - Minor loss of function, or other problem where easy workaround is present.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                pkulzer Paige Kulzer created issue -
                pkulzer Paige Kulzer made changes -
                Field Original Value New Value
                Epic Link IGBF-1765 [ 17855 ]
                pkulzer Paige Kulzer made changes -
                Link This issue relates to IGBF-1088 [ IGBF-1088 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 8 [ 192 ]
                ann.loraine Ann Loraine made changes -
                Summary Investigate: How does FindJunctions (Top Hat) differ from Find Junctions? Improve documentation: Explain how our FindJunctions is different from Top Hat find junctions feature
                nfreese Nowlan Freese made changes -
                Link This issue relates to IGBF-3679 [ IGBF-3679 ]
                nfreese Nowlan Freese made changes -
                Sprint Spring 9 [ 193 ]
                pkulzer Paige Kulzer made changes -
                Assignee Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 9 [ 193 ] Spring 9, Spring 10 [ 193, 194 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                ann.loraine Ann Loraine made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ] Paige Kulzer [ pkulzer ]
                ann.loraine Ann Loraine made changes -
                Link This issue relates to IGBF-3738 [ IGBF-3738 ]
                pkulzer Paige Kulzer made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                pkulzer Paige Kulzer made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                pkulzer Paige Kulzer made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                pkulzer Paige Kulzer made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                pkulzer Paige Kulzer made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ] Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                ann.loraine Ann Loraine made changes -
                Status Post-merge Testing In Progress [ 10003 ] To-Do [ 10305 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 9, Spring 10 [ 193, 194 ] Spring 9, Spring 10, Summer 1 [ 193, 194, 195 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                pkulzer Paige Kulzer made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                pkulzer Paige Kulzer made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                pkulzer Paige Kulzer made changes -
                Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ] Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ] Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                pkulzer Paige Kulzer made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                pkulzer Paige Kulzer made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                pkulzer Paige Kulzer made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                pkulzer Paige Kulzer made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                pkulzer Paige Kulzer made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                pkulzer Paige Kulzer made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ] Ann Loraine [ aloraine ]

                  People

                  • Assignee:
                    ann.loraine Ann Loraine
                    Reporter:
                    pkulzer Paige Kulzer
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                    Dates

                    • Created:
                      Updated:
                      Resolved: