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  1. IGB
  2. IGBF-3695

Create Galaxy-to-IGB training materials

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Now that we've submitted an abstract for the Galaxy 2024 conference, it would be good to create some training materials for a possible talk/demo.

          Task: Create a slide deck that walks through how to do data analysis in Galaxy, how to open Galaxy data in IGB, and how to visually analyze that data with IGB. Use tardigrade RNA-seq data to demonstrate all of this. Incorporate a few slides that identify any hitches I had to overcome to create the overall workflow and how I overcame them (e.g., ENA and NCBI formatting files differently, adding tardigrades as a custom genome, etc.).

            Attachments

              Issue Links

              relates to

              Task - A task that needs to be done. IGBF-3699 Document the experience of processing data in Galaxy

              • Major - Major loss of function.
              • Closed

              Task - A task that needs to be done. IGBF-3691 Draft and submit an abstract for Galaxy 2024

              • Major - Major loss of function.
              • Closed

                Activity

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                pkulzer Paige Kulzer created issue -
                pkulzer Paige Kulzer made changes -
                Field Original Value New Value
                Epic Link IGBF-2809 [ 19325 ]
                pkulzer Paige Kulzer made changes -
                Link This issue relates to IGBF-3691 [ IGBF-3691 ]
                pkulzer Paige Kulzer made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                pkulzer Paige Kulzer made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                pkulzer Paige Kulzer made changes -
                Link This issue relates to IGBF-3699 [ IGBF-3699 ]
                pkulzer Paige Kulzer made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 8 [ 192 ] Spring 8, Spring 9 [ 192, 193 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                pkulzer Paige Kulzer made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer made changes -
                Link This issue relates to IGBF-3724 [ IGBF-3724 ]
                pkulzer Paige Kulzer made changes -
                Link This issue relates to IGBF-3724 [ IGBF-3724 ]
                ann.loraine Ann Loraine made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                ann.loraine Ann Loraine made changes -
                Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
                ann.loraine Ann Loraine made changes -
                Assignee Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 8, Spring 9 [ 192, 193 ] Spring 8, Spring 9, Spring 10 [ 192, 193, 194 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                pkulzer Paige Kulzer made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ] Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                ann.loraine Ann Loraine made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ] Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                pkulzer Paige Kulzer made changes -
                Assignee Paige Kulzer [ pkulzer ]
                ann.loraine Ann Loraine made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                ann.loraine Ann Loraine made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                ann.loraine Ann Loraine made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                ann.loraine Ann Loraine made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                ann.loraine Ann Loraine made changes -
                Assignee Paige Kulzer [ pkulzer ]

                  People

                  • Assignee:
                    pkulzer Paige Kulzer
                    Reporter:
                    pkulzer Paige Kulzer
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                    Dates

                    • Created:
                      Updated:
                      Resolved: