Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3698

Fix right-click Filter... in IGB when track is separated into (+) and (-) strands

    Details

    • Type: Bug
    • Status: In Progress (View Workflow)
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Situation: IGB users can use the right-click Filter... option in IGB to filter annotations or reads in a track based on properties such as score. However, there is a bug where if the track is separated by strand and the filter is applied to one strand and then removed in the other strand, the data do not reappear.

      Task: Fix it so that if a filter is applied to a strand it can only be removed from that strand.

      To reproduce the issue:

      1. Start IGB
      2. Select the Arabidopsis genome
      3. Navigate to Chr1:8,673,056-8,677,891
      4. Right-click on the Araport track and select Filter...
      5. In the Filter menu, select Add
      6. In the Add filter menu, select Show Only Score
      7. Click OK
      8. Click OK
      9. The gene model in the Araport track should now be hidden
      10. Right-click on the Araport track and select Filter...
      11. Select the Score filter and click on the Remove button
      12. Click OK
        The filter should now be removed, but the gene model in the Araport track is still missing.

        Attachments

          Issue Links

            Activity

              People

              • Assignee:
                jsirigin Jaya Sravani Sirigineedi
                Reporter:
                nfreese Nowlan Freese
              • Votes:
                0 Vote for this issue
                Watchers:
                1 Start watching this issue

                Dates

                • Created:
                  Updated: