Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:1.5
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Epic Link:
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Sprint:Spring 9
Description
This task is to check the 2 SRA datasets that are related to Rasha's upcoming papers.
Email from Mark:
We're working on a paper that will draw on three data sets and we want to make sure we have the SRA submissions all set.
1. Heinz, Tam, Nag pollen tubes
@ 30', 60', and 120'
@ 28 and 34
This experiment was performed by Rasha
2. Mature Pollen
28c and 37c for one hour
Heinz, Tam, Nag, and Malintka
This experiment was performed by Michelle Medina
Do we have a stand alone SRA entries for these experiments? I just want to check to make sure so that we can cite it properly.
The third data set is proteomics data
Heinz, Tam, Nag pollen tubes
@ 30' and 120'
@ 28 and 34
Mature Pollen - no treatment (dry pollen)
This experiment was performed by Rasha. Do you have any advice on a repository for these proteomics data?
We need to
- Check the pollen tube data
- Check the mature Pollen data
- Make a table that is a subset of the data they used.
- Explore if there is an NCBi proteomics data solution.