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  1. IGB
  2. IGBF-3722

Fix Color By Property matching any part of numeric value

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Minor
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: 10.1.0
    • Labels:
      None

      Description

      Situation: While adding additional properties to the Color By feature in IGB (IGBF-3640) we found that the Color By > Property behaved oddly. For example, if no value is entered for the property > id then everything is counted as being a match. Or, for example, if an id contains the string AT1G29990 and the value searched for is AT1G2, then all annotations with AT1G2 would be identified.

      Task: Determine if this is the intended behavior. While this may make sense for searching for strings, it may be confusing for users with the expanded properties now including numeric values.

      To reproduce the issue:

      1. Start IGB
      2. Open the A_thaliana_Jun_2009 genome
      3. Right-click on the Araport track name
      4. Select Color By...
      5. In the Color By dropdown, select Property
      6. In the property dropdown, select id
      7. Enter a value of AT1G2
      8. Click OK

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            nfreese Nowlan Freese created issue -
            nfreese Nowlan Freese made changes -
            Field Original Value New Value
            Epic Link IGBF-3129 [ 21675 ]
            nfreese Nowlan Freese made changes -
            Link This issue relates to IGBF-3640 [ IGBF-3640 ]
            nfreese Nowlan Freese made changes -
            Description Situation: While adding additional properties to the Color By feature in IGB (IGBF-3640) we found that the Color By > Property behaved oddly. For example, if no value is entered for the property > id then everything is counted as being a match. Or, for example, if an id contains the string AT1G29990 and the value searched for is AT1G, then all annotations with AT1G would be identified.

            Task: Determine if this is the intended behavior. While this may make sense for searching for strings, it may be confusing for users with the expanded properties now including numeric values.
            Situation: While adding additional properties to the Color By feature in IGB (IGBF-3640) we found that the Color By > Property behaved oddly. For example, if no value is entered for the property > id then everything is counted as being a match. Or, for example, if an id contains the string AT1G29990 and the value searched for is AT1G2, then all annotations with AT1G2 would be identified.

            Task: Determine if this is the intended behavior. While this may make sense for searching for strings, it may be confusing for users with the expanded properties now including numeric values.

            To reproduce the issue:
            # Start IGB
            # Open the A_thaliana_Jun_2009 genome
            # Right-click on the Araport track name
            # Select Color By...
            # In the Color By dropdown, select Property
            # In the property dropdown, select id
            # Enter a value of AT1G2
            # Click OK
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Sprint Summer 1 [ 195 ] Spring 10 [ 194 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            jsirigin Jaya Sravani Sirigineedi made changes -
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            nfreese Nowlan Freese made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            nfreese Nowlan Freese made changes -
            Summary Investigate Color By Property matching any part of the string Fix Color By Property matching any part of numeric value
            nfreese Nowlan Freese made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            nfreese Nowlan Freese made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            ann.loraine Ann Loraine made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            ann.loraine Ann Loraine made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            ann.loraine Ann Loraine made changes -
            Assignee Ann Loraine [ aloraine ]
            nfreese Nowlan Freese made changes -
            Assignee Ann Loraine [ aloraine ]
            nfreese Nowlan Freese made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            nfreese Nowlan Freese made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            nfreese Nowlan Freese made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            nfreese Nowlan Freese made changes -
            Fix Version/s 10.1.0 [ 11000 ]

              People

              • Assignee:
                jsirigin Jaya Sravani Sirigineedi
                Reporter:
                nfreese Nowlan Freese
              • Votes:
                0 Vote for this issue
                Watchers:
                3 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: