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  1. IGB
  2. IGBF-3738

Update find junctions repo even more - main branch, bitbucket pipeline, more readme text

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
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      Description

      Three additional tasks to update / improve the find junction code in bitbucket:

      1) Now that find junctions is recommended to be built using JDK 21, we need to update the bitbucket pipelines file. The pipeline might not even run, so this task may take some effort to debug it.

      2) Also, we may also want to indicate in the README which genome a user needs to open in order to view the "test" bed file, and explain to the user what they ought to see in IGB when they do that. That way, if there is a problem, they will know.

      3) Lastly, let's change the main development branch from "master" to "main".

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              • Assignee:
                jsirigin Jaya Sravani Sirigineedi (Inactive)
                Reporter:
                ann.loraine Ann Loraine
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                  Updated:
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