Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:1
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Epic Link:
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Sprint:Spring 10, Summer 1, Summer 2
Description
Situation: The RNA-Seq Quickload needs reorganizing prior to the ASPB workshop. Specifically, the Muday Lab folder is currently organized in a way that makes sense, but I think that we could optimize this folder for the workshop by organizing it a bit differently.
Tasks:
1. Reorganize the Muday Lab folder:
- List all of the A (are) samples first, then V (VF36), then F (VF36-F3H-T3).
- Within each of these subgroups, keep them listed in order first by time point, then by temperature, then by replicate.
- Do this for all three subfolders (Reads, Coverage Graphs, and Junctions).
2. Give the last folder in the tomato RNA-Seq Quickload ("SRP328042 - anther development under simulated drought stress") a name that matches with the other folders. I believe the PI associated with that SRP data is Gang Lu. Here's a link to their paper: https://www.mdpi.com/2073-4409/10/7/1809.
With all of this information, the title of the folder after renaming should be something like "Lu Lab - anther, # varieties, drought stress, # minutes (SRP328042)".
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