Details
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Type: Task
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Status: Closed (View Workflow)
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Priority: Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:5
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Epic Link:
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Sprint:Summer 2, Summer 3, Summer 4
Description
Optimize the loadSupportedGenomeVersions method. As this method loadSupportedGenomeVersions() which is responsible for adding the species to the species list for a given provider is the issue, this has a loop that goes over all the genomeVersions that the provider has in the case of Ensembl it's 33694 so the method is taking a very long time to run, optimize this by introducing multi-threading or any other optimization technique.
Attachments
Issue Links
- relates to
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IGBF-3780 Implement logic to load the available genomes from Ensembl API
- Closed
Changed the for loop to use multi-threading, only working for two ensembl divisions, right now working on adding the ensembl species to the species.txt file the logic which was included as part of
IGBF-3780only removes the genome versions of a species that are already present but if ensembl has another version then it's getting added.