Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3783

Break-down cluster projection code repository

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Explain the scope of the CCP code and how the algorithm is used in datasets.

          Cluster Projection Github link: https://github.com/hozumiyu/CCP

            Attachments

              Activity

              Ascending order - Click to sort in descending order
              karthik Karthik Raveendran created issue -
              karthik Karthik Raveendran made changes -
              Field Original Value New Value
              Assignee Ann Loraine [ aloraine ] Karthik Raveendran [ karthik ]
              karthik Karthik Raveendran made changes -
              Summary Review Review CCP Github and
              karthik Karthik Raveendran made changes -
              Epic Link IGBF-3765 [ 22984 ]
              karthik Karthik Raveendran made changes -
              Summary Review CCP Github and Break-down cluster projection code repository
              Description Explain the scope of the CCP code and how the algorithm is used in datasets.

              Cluster Projection Github link: https://github.com/hozumiyu/CCP
              Story Points 2
              Sprint Summer 3 [ 197 ]
              karthik Karthik Raveendran made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              karthik Karthik Raveendran made changes -
              Status In Progress [ 3 ] To-Do [ 10305 ]
              karthik Karthik Raveendran made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              Hide
              Permalink
              karthik Karthik Raveendran added a comment -

              There are three repositories in the github profile above that I am interested in:
              1) https://github.com/hozumiyu/CCP-scRNAseq-UMAP-TSNE
              2) https://github.com/hozumiyu/CCP-for-Single-Cell-RNA-Sequencing
              3) https://github.com/hozumiyu/CCP

              Currently I have implemented the first repo where CCP is used in the dataset to generate UMAP and t-SNE. These are implemented in python.

              Show
              karthik Karthik Raveendran added a comment - There are three repositories in the github profile above that I am interested in: 1) https://github.com/hozumiyu/CCP-scRNAseq-UMAP-TSNE 2) https://github.com/hozumiyu/CCP-for-Single-Cell-RNA-Sequencing 3) https://github.com/hozumiyu/CCP Currently I have implemented the first repo where CCP is used in the dataset to generate UMAP and t-SNE. These are implemented in python.
              karthik Karthik Raveendran made changes -
              Status In Progress [ 3 ] To-Do [ 10305 ]
              ann.loraine Ann Loraine made changes -
              Sprint Summer 3 [ 197 ] Summer 3, Summer 4 [ 197, 198 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              ann.loraine Ann Loraine made changes -
              Sprint Summer 3, Summer 4 [ 197, 198 ] Summer 3, Summer 4, Summer 5 [ 197, 198, 199 ]
              ann.loraine Ann Loraine made changes -
              Rank Ranked higher
              karthik Karthik Raveendran made changes -
              Sprint Summer 3, Summer 4, Summer 5 [ 197, 198, 199 ] Summer 3, Summer 4 [ 197, 198 ]
              ann.loraine Ann Loraine made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              ann.loraine Ann Loraine made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              ann.loraine Ann Loraine made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              ann.loraine Ann Loraine made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              ann.loraine Ann Loraine made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              ann.loraine Ann Loraine made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              ann.loraine Ann Loraine made changes -
              Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
              ann.loraine Ann Loraine made changes -
              Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
              ann.loraine Ann Loraine made changes -
              Resolution Done [ 10000 ]
              Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                People

                • Assignee:
                  karthik Karthik Raveendran
                  Reporter:
                  karthik Karthik Raveendran
                • Votes:
                  0 Vote for this issue
                  Watchers:
                  1 Start watching this issue

                  Dates

                  • Created:
                    Updated:
                    Resolved: