Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:4
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Epic Link:
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Sprint:Summer 3, Summer 4, Summer 5
Description
To gain a high level understanding of RadViz, go through the Seurat guided clustering tutorial of PBMC 3K dataset and apply RadViz to the dataset. Goal is to understand the thought process of choosing anchors for a meaningful visualizations, the use of color and other dimensions for further pattern recognition and discern the value of RadViz in single cell data.
Seurat Guided Clustering Tutorial: https://satijalab.org/seurat/articles/pbmc3k_tutorial
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Description | To gain a high level understanding of RadViz, go through the Seurat guided clustering tutorial of PBMC 3K dataset and apply RadViz to the dataset. Goal is to understand the thought process of choosing anchors for a meaningful visualizations, the use of color and other dimensions for further pattern recognition and discern the value of RadViz in single cell data. |
To gain a high level understanding of RadViz, go through the Seurat guided clustering tutorial of PBMC 3K dataset and apply RadViz to the dataset. Goal is to understand the thought process of choosing anchors for a meaningful visualizations, the use of color and other dimensions for further pattern recognition and discern the value of RadViz in single cell data.
Seurat Guided Clustering Tutorial: https://satijalab.org/seurat/articles/pbmc3k_tutorial |
| Epic Link | IGBF-3765 [ 22984 ] |
| Sprint | Summer 3 [ 197 ] | Summer 3, Summer 4 [ 197, 198 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Sprint | Summer 3, Summer 4 [ 197, 198 ] | Summer 3, Summer 4, Summer 5 [ 197, 198, 199 ] |
| Rank | Ranked higher |
| Sprint | Summer 3, Summer 4, Summer 5 [ 197, 198, 199 ] | Summer 3, Summer 4, Summer 5, Summer 6 [ 197, 198, 199, 200 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Sprint | Summer 3, Summer 4, Summer 5, Summer 6 [ 197, 198, 199, 200 ] | Summer 3, Summer 4, Summer 5 [ 197, 198, 199 ] |
| Assignee | Karthik Raveendran [ karthik ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Assignee | Karthik Raveendran [ karthik ] |