Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Minor
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Summer 4, Summer 5, Summer 6, Summer 7
Description
Goal:
To dive deeper into RNA-Quast and determine what our results are.
The tool works on the cluster and Brandon has got it to run on the de novo assemblies.
So while we got results, we need to be able to interpret them.
And figure out how to harness this tool.
So that means reading the original paper and exploring how other papers (rnaSpades paper) use this as a metric for assessing their assemblies.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2993 [ 21429 ] |
| Sprint | Summer 4 [ 198 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Sprint | Summer 4 [ 198 ] | Summer 4, Summer 5 [ 198, 199 ] |
| Rank | Ranked higher |
| Sprint | Summer 4, Summer 5 [ 198, 199 ] | Summer 4, Summer 5, Summer 6 [ 198, 199, 200 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Robert Reid [ robertreid ] | Brandon Bendickson [ bbendick ] |
| Sprint | Summer 4, Summer 5, Summer 6 [ 198, 199, 200 ] | Summer 4, Summer 5, Summer 6, Summer 7 [ 198, 199, 200, 201 ] |
| Rank | Ranked higher |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |