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  1. IGB
  2. IGBF-3862

RnaQuast on RNASpades

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
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          Description

          GOAL:
          To run the rnaQuast script to the de novo rnaSpades results.

          Once we have these tables, we can compare to trinity run.

          An example of the slurm script is here:
          /projects/tomato_genome/scripts/rob/rnaquastRun.slurm

          Ticket IGBF-3857 will use these results as well.

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                • Assignee:
                  bbendick Brandon Bendickson
                  Reporter:
                  robofjoy Robert Reid
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                    Updated:
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