Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:2
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Epic Link:
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Sprint:Fall 7
Description
Situation: IGB currently hosts the 2005 version of the Oryzias latipes genome via UCSC's REST API, but a new version was released in 2017 that can be added to IGB.
Task: Add the 2017 version of the Oryzias latipes genome and annotation to IGB.
Oryzias latipes (ASM223467v1) - https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002234675.1/
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-3823 [ 23122 ] |
| Description |
Situation: IGB currently hosts the 2005 version of the Oryzias latipes genome, but a new version was released in 2017 that can be added to IGB.
Task: Add the 2017 version of the Oryzias latipes genome and annotation to IGB. Oryzias latipes (ASM223467v1) - https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002234675.1/ |
Situation: IGB currently hosts the 2005 version of the Oryzias latipes genome via UCSC's REST API, but a new version was released in 2017 that can be added to IGB.
Task: Add the 2017 version of the Oryzias latipes genome and annotation to IGB. Oryzias latipes (ASM223467v1) - https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002234675.1/ |
| Sprint | Fall 2 [ 203 ] |
| Rank | Ranked higher |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Nowlan Freese [ nfreese ] |
| Rank | Ranked higher |
| Sprint | Fall 2 [ 203 ] | Fall 3 [ 204 ] |
| Sprint | Fall 3 [ 204 ] | Fall 4 [ 205 ] |
| Sprint | Fall 4 [ 205 ] | Fall 5 [ 206 ] |
| Sprint | Fall 5 [ 206 ] | Fall 6 [ 207 ] |
| Sprint | Fall 6 [ 207 ] | Fall 7 [ 208 ] |
| Rank | Ranked higher |
| Assignee | Nowlan Freese [ nfreese ] | Paige Kulzer [ pkulzer ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Nowlan Freese [ nfreese ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Attachment | species.txt [ 18583 ] |
| Assignee | Nowlan Freese [ nfreese ] | Paige Kulzer [ pkulzer ] |
| Status | First Level Review in Progress [ 10301 ] | To-Do [ 10305 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Nowlan Freese [ nfreese ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Assignee | Nowlan Freese [ nfreese ] | Paige Kulzer [ pkulzer ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Assignee | Paige Kulzer [ pkulzer ] | Nowlan Freese [ nfreese ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Assignee | Nowlan Freese [ nfreese ] | Paige Kulzer [ pkulzer ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |