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  1. IGB
  2. IGBF-3926

Organize UCSC data by "group" and "subgroup"

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: 10.1.0
    • Labels:
      None

      Description

      Situation: UCSC REST data is currently organized by file "type", which often separates data into large folders of bed, genePred, etc. The UCSC genome browser website uses groupings based on the data itself, for example, Genes and Gene Predictions, Expression and Regulation, etc.

      Task: Organize the UCSC REST data by the "group" value provided through the API.

        Attachments

          Issue Links

            Activity

            nfreese Nowlan Freese created issue -
            nfreese Nowlan Freese made changes -
            Field Original Value New Value
            Epic Link IGBF-3129 [ 21675 ]
            nfreese Nowlan Freese made changes -
            Link This issue relates to IGBF-3689 [ IGBF-3689 ]
            nfreese Nowlan Freese made changes -
            Story Points 2 3
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status To-Do [ 10305 ] In Progress [ 3 ]
            nfreese Nowlan Freese made changes -
            Fix Version/s 10.1.0 [ 11000 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Attachment UCSC_new_folder_structure.png [ 18525 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Attachment new_logic_logs.png [ 18526 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Attachment old_logic_logs.png [ 18527 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Karthik Raveendran [ karthik ]
            karthik Karthik Raveendran made changes -
            Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
            karthik Karthik Raveendran made changes -
            Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
            karthik Karthik Raveendran made changes -
            Assignee Karthik Raveendran [ karthik ] Jaya Sravani Sirigineedi [ jsirigin ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
            jsirigin Jaya Sravani Sirigineedi made changes -
            Assignee Jaya Sravani Sirigineedi [ jsirigin ]
            ann.loraine Ann Loraine made changes -
            Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
            ann.loraine Ann Loraine made changes -
            Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
            karthik Karthik Raveendran made changes -
            Assignee Karthik Raveendran [ karthik ]
            karthik Karthik Raveendran made changes -
            Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
            karthik Karthik Raveendran made changes -
            Resolution Done [ 10000 ]
            Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
            karthik Karthik Raveendran made changes -
            Assignee Karthik Raveendran [ karthik ] Jaya Sravani Sirigineedi [ jsirigin ]

              People

              • Assignee:
                jsirigin Jaya Sravani Sirigineedi
                Reporter:
                nfreese Nowlan Freese
              • Votes:
                0 Vote for this issue
                Watchers:
                4 Start watching this issue

                Dates

                • Created:
                  Updated:
                  Resolved: