Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-3965

Pan Genome pilot project

        Details

        • Type: Task
        • Status: To-Do (View Workflow)
        • Priority: Major
        • Resolution: Unresolved
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Purpose: To explore how to generate an actual Pan genome using Cactus and it's related tool suite.

          1. Get cactus installed on cluster
          2. Decide on some Tomato genome sequence sets that can compliment Heinz
          3. Download an assortment of these
          4. Pick one 1 align to Heinz
          5. Create our first pan genome graph.

            Attachments

              Activity

              There are no comments yet on this issue.

                People

                • Assignee:
                  Unassigned
                  Reporter:
                  robofjoy Robert Reid
                • Votes:
                  0 Vote for this issue
                  Watchers:
                  1 Start watching this issue

                  Dates

                  • Created:
                    Updated: