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  1. IGB
  2. IGBF-3976

Investigate: Visualizing Hi-C data in IGB

    Details

    • Type: Task
    • Status: To-Do (View Workflow)
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
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      Description

      Situation: I talked with Cory Padilla at ASHG 2024 - he's a product manager at Cantata Bio (formerly Dovetail Genomics) which produces Hi-C kits. He is really excited about the idea of collaborating and brainstorming ways in which IGB can visualize Hi-C data and become part of their suggested bioinformatics workflow.

      Task: Reach out to Cory and set up a meeting to discuss ideas for visualizing Hi-C data. We should also look into other genome browsers (specifically Wash-U) and how they currently display Hi-C data. Locating some example data would be a great help, too.

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            • Assignee:
              pkulzer Paige Kulzer
              Reporter:
              pkulzer Paige Kulzer
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