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  1. IGB
  2. IGBF-4006

Update IGB's species and synonyms files

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: 10.2.0
    • Labels:
      None

      Description

      Situation: I've prepared four new genomes to be added to IGB Quickload via svn. Now, IGB's species and synonym's files need to be updated so that these genomes can be included in a future IGB release.

      Task: Add the following to IGB's species.txt and synonyms.txt files:

      species.txt

      Aedes albopictus	Asian tiger mosquito	A_albopictus
      Capitella teleta	Capitella teleta	C_teleta
      Dama dama	Fallow deer	D_dama
      Hydra vulgaris	Swiftwater hydra	H_vulgaris
      Oryzias latipes	Japanese medaka	O_latipes
      Vanessa cardui	Painted lady	V_cardui
      

      synonyms.txt

      A_albopictus_Jan_2024	AalbF5
      C_teleta_Jan_2013	Capca1
      D_dama_Nov_2023	ASM3311817v1
      H_vulgaris_Feb_2022	HydraT2T_AEP
      O_latipes_Jul_2017	ASM223467v1
      V_cardui_Feb_2021	ilVanCard2.1
      

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            People

            • Assignee:
              nfreese Nowlan Freese
              Reporter:
              pkulzer Paige Kulzer (Inactive)
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              Dates

              • Created:
                Updated:
                Resolved: