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  1. IGB
  2. IGBF-4044

Get familiar with InterproScan on the HPC

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      GOAL:
      To get familiar with Interproscan so that we can annotate the remaining genes that lack an SL5 or NR DB annotation.

      Need to get the tool ready for using. It has been a few years since it has been used and the ENV has changed. Hopefully the tool still works as is.

      We need to identify what sequences we wish to run through.

        Attachments

          Activity

          robofjoy Robert Reid created issue -
          robofjoy Robert Reid made changes -
          Field Original Value New Value
          Epic Link IGBF-2993 [ 21429 ]
          bbendick Brandon Bendickson made changes -
          Status To-Do [ 10305 ] In Progress [ 3 ]
          bbendick Brandon Bendickson made changes -
          Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
          bbendick Brandon Bendickson made changes -
          Assignee Brandon Bendickson [ bbendick ] Robert Reid [ robertreid ]
          robofjoy Robert Reid made changes -
          Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
          robofjoy Robert Reid made changes -
          Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
          robofjoy Robert Reid made changes -
          Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
          robofjoy Robert Reid made changes -
          Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
          robofjoy Robert Reid made changes -
          Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
          robofjoy Robert Reid made changes -
          Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
          robofjoy Robert Reid made changes -
          Resolution Done [ 10000 ]
          Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

            People

            • Assignee:
              robofjoy Robert Reid
              Reporter:
              robofjoy Robert Reid
            • Votes:
              0 Vote for this issue
              Watchers:
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              Dates

              • Created:
                Updated:
                Resolved: