[IGBF-4079] GitHub backup of ref free deseq2 scripts - JIRA UNCC

Details

Type: Task
Status: Closed (View Workflow)
Priority: Major
Resolution: Done
Affects Version/s: None
Fix Version/s: None
Labels:
None

Story Points:
2
Epic Link:
Support NSF pollen grant
Sprint:
Spring 2, Spring 3

Description

GOAL: To establish a Github repo for the various scripts used in the reference free pipeline. This will be shared as part of the publication.

First, let's get the Deseq scripts put in place......

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Activity

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Robert Reid created issue - 28/Jan/25 2:04 PM

Robert Reid made changes - 28/Jan/25 2:04 PM

Field	Original Value	New Value
Epic Link		IGBF-2993 [ 21429 ]

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Brandon Bendickson added a comment - 17/Feb/25 11:49 AM

Added deseq scripts to a github repo, working on organizing and uploading other relevant scripts.

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Brandon Bendickson added a comment - 17/Feb/25 11:49 AM Added deseq scripts to a github repo, working on organizing and uploading other relevant scripts.

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Brandon Bendickson added a comment - 17/Feb/25 11:49 AM

link: https://github.com/BrandonBinf/Tomato_Ref_Free_Pipeline

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Brandon Bendickson added a comment - 17/Feb/25 11:49 AM link: https://github.com/BrandonBinf/Tomato_Ref_Free_Pipeline

Brandon Bendickson made changes - 17/Feb/25 11:51 AM

Status

To-Do [ 10305 ]

In Progress [ 3 ]

Ann Loraine made changes - 24/Feb/25 8:01 AM

Sprint

Spring 2 [ 211 ]

Spring 2, Spring 3 [ 211, 212 ]

Ann Loraine made changes - 24/Feb/25 8:01 AM

Rank

Ranked higher

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Brandon Bendickson added a comment - 26/Feb/25 9:45 AM

Will continue to update github as we continue the project. The deseq2 scripts have been uploaded.

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Brandon Bendickson added a comment - 26/Feb/25 9:45 AM Will continue to update github as we continue the project. The deseq2 scripts have been uploaded.