Details
-
Type:
Epic
-
Status: In Progress (View Workflow)
-
Priority:
Major
-
Resolution: Unresolved
-
Affects Version/s: None
-
Fix Version/s: None
-
Labels:None
-
Epic Name:Add UCSC GenArk to IGB
Description
UCSC has a Genome Archive (GenArk) collection, which is an assembly hub that currently has ~5k genomes, and the APIs are similar to the UCSC genomes. The genomes can be accessed at https://api.genome.ucsc.edu/list/genarkGenomes and all the genomes have hubUrls which can be used to build Quickloads and load to IGB.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Assignee | Ann Loraine [ aloraine ] | Jaya Sravani Sirigineedi [ jsirigin ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Summary | Add UCSC GenArk to IGB | Add UCSC's GenArk to IGB |
| Summary | Add UCSC's GenArk to IGB | Add UCSC GenArk to IGB |
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child |
|
| Epic Child | IGBF-4207 [ 23504 ] |
| Epic Child | IGBF-4207 [ 23504 ] |
| Epic Child |
|
| Epic Child | IGBF-4356 [ 23749 ] |