Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:1
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Epic Link:
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Sprint:Spring 2
Description
GOAL: Using Brandon's spreadsheet below, make 4 bar graphs, one for each variety. each bar graph will have 3 bars:
1. prefilter
2. After adapter
3. After adapter and contaminant filtering.
The numbers that Brandon produced are here:
https://docs.google.com/spreadsheets/d/1fWZn0HTq1ZfM0hrL02CjD0nZ_5Q2frCkYH2945yOZDU/edit?gid=0#gid=0
This becomes a single slide in the presentation:
https://docs.google.com/presentation/d/1qhQQw_Sc_AsUTJZXr1j3G6p7DQ_4fFveYpDst9jh13E/edit?usp=sharing
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2993 [ 21429 ] |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
Made colored bar graphs, and added them to slides.
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |
I think we do a bar graph of # of Nucleotides removed.
From the residue counts row, use these #'s.
We can't do # of sequences because we actually increase that # by splitting some of our contigs.
The average length barely moves so it is not worth reporting.