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  1. IGB
  2. IGBF-4166

Collect VCF files and test new vcf parsing

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None
        • Story Points:
          4
        • Epic Link:
        • Sprint:
          Spring 3, Spring 5, Spring 6, Spring 8, Summer 1

          Description

          Situation: Collect vcf files for testing changes

          Task: Gather and test vcf files

            Attachments

              Issue Links

              clones

              Task - A task that needs to be done. IGBF-4153 Eliminate lineProcessor implementation in VCF loader in IGB

              • Major - Major loss of function.
              • Closed
              relates to

              Task - A task that needs to be done. IGBF-4219 Fix loading remote VCF files

              • Major - Major loss of function.
              • Closed

                Activity

                Ascending order - Click to sort in descending order
                sjagarap saideepthi jagarapu (Inactive) created issue -
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Field Original Value New Value
                Epic Link IGBF-3836 [ 23135 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Link This issue clones IGBF-4153 [ IGBF-4153 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Description Situation: loaders depends on LineProcessor for parsing and loading genomic regions

                Task: Investigate how we could eliminate the LineProcessor dependency completely, streamlining the parsing process and displaying region.                 		Situation: Collect vcf files for testing changes

                Task: Gather vcf files
                nfreese Nowlan Freese made changes -
                Attachment vcf_sample_files.zip [ 18661 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 3, Spring 5 [ 212, 214 ] Spring 3, Spring 5, Spring 6 [ 212, 214, 215 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                nfreese Nowlan Freese made changes -
                Summary Collect VCF files for testing changes Collect VCF files and test new vcf parsing
                nfreese Nowlan Freese made changes -
                Description Situation: Collect vcf files for testing changes

                Task: Gather vcf files                 		Situation: Collect vcf files for testing changes

                Task: Gather and test vcf files
                nfreese Nowlan Freese made changes -
                Sprint Spring 3, Spring 5, Spring 6 [ 212, 214, 215 ] Spring 3, Spring 5, Spring 6, Spring 7 [ 212, 214, 215, 216 ]
                nfreese Nowlan Freese made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Sprint Spring 3, Spring 5, Spring 6, Spring 7 [ 212, 214, 215, 216 ] Spring 3, Spring 5, Spring 6, Spring 8 [ 212, 214, 215, 217 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Link This issue is cloned by IGBF-4219 [ IGBF-4219 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Status First Level Review in Progress [ 10301 ] Needs 1st Level Review [ 10005 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Link This issue relates to IGBF-4219 [ IGBF-4219 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Link This issue is cloned by IGBF-4219 [ IGBF-4219 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 3, Spring 5, Spring 6, Spring 8 [ 212, 214, 215, 217 ] Spring 3, Spring 5, Spring 6, Spring 8, Summer 1 [ 212, 214, 215, 217, 218 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                nfreese Nowlan Freese made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                nfreese Nowlan Freese made changes -
                Status First Level Review in Progress [ 10301 ] To-Do [ 10305 ]
                nfreese Nowlan Freese made changes -
                Status To-Do [ 10305 ] Pull Request Submitted [ 10101 ]
                nfreese Nowlan Freese made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                nfreese Nowlan Freese made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                nfreese Nowlan Freese made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                nfreese Nowlan Freese made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                  People

                  • Assignee:
                    sjagarap saideepthi jagarapu (Inactive)
                    Reporter:
                    sjagarap saideepthi jagarapu (Inactive)
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    2 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: