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  1. IGB
  2. IGBF-4183

Cross The wires Heinz37 versus the 25C versions of other varieties

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          Run Deseq on the Kelsey unpollinated samples.

          But this time it is Heinz at 37C. VERSUS each variety at 25C.

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              robofjoy Robert Reid created issue -
              robofjoy Robert Reid made changes -
              Field Original Value New Value
              Epic Link IGBF-2993 [ 21429 ]
              bbendick Brandon Bendickson made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              bbendick Brandon Bendickson made changes -
              Status In Progress [ 3 ] To-Do [ 10305 ]
              bbendick Brandon Bendickson made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
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              bbendick Brandon Bendickson added a comment -

              Ran deseq twice for both heinz 37C at 3hr and 8hr for each variety. Uploaded figures to google slide, can also extract the gene lists if desired.

              Show
              bbendick Brandon Bendickson added a comment - Ran deseq twice for both heinz 37C at 3hr and 8hr for each variety. Uploaded figures to google slide, can also extract the gene lists if desired.
              nfreese Nowlan Freese made changes -
              Sprint Spring 7 [ 216 ] Spring 7, Spring 8 [ 216, 217 ]
              nfreese Nowlan Freese made changes -
              Rank Ranked higher
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              bbendick Brandon Bendickson added a comment -

              Uploaded results to Drive.

              3hr: https://drive.google.com/drive/u/0/folders/1FkztcHFCL5wwkrFq_MjQCwBYtDYt9zb5
              8hr: https://drive.google.com/drive/u/0/folders/1jUCQ3b8CCVrZcjkywTinQaeuI01km5GI

              Show
              bbendick Brandon Bendickson added a comment - Uploaded results to Drive. 3hr: https://drive.google.com/drive/u/0/folders/1FkztcHFCL5wwkrFq_MjQCwBYtDYt9zb5 8hr: https://drive.google.com/drive/u/0/folders/1jUCQ3b8CCVrZcjkywTinQaeuI01km5GI
              bbendick Brandon Bendickson made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              bbendick Brandon Bendickson made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              bbendick Brandon Bendickson made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              bbendick Brandon Bendickson made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              bbendick Brandon Bendickson made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              bbendick Brandon Bendickson made changes -
              Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
              bbendick Brandon Bendickson made changes -
              Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
              bbendick Brandon Bendickson made changes -
              Resolution Done [ 10000 ]
              Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
              bbendick Brandon Bendickson made changes -
              Resolution Done [ 10000 ]
              Status Closed [ 6 ] To-Do [ 10305 ]
              bbendick Brandon Bendickson made changes -
              Status To-Do [ 10305 ] In Progress [ 3 ]
              nfreese Nowlan Freese made changes -
              Summary Cross The wires Heinz37 verus the 25C versions of other varieties Cross The wires Heinz37 versus the 25C versions of other varieties
              bbendick Brandon Bendickson made changes -
              Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
              bbendick Brandon Bendickson made changes -
              Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
              bbendick Brandon Bendickson made changes -
              Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
              bbendick Brandon Bendickson made changes -
              Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
              bbendick Brandon Bendickson made changes -
              Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
              bbendick Brandon Bendickson made changes -
              Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
              bbendick Brandon Bendickson made changes -
              Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
              bbendick Brandon Bendickson made changes -
              Resolution Done [ 10000 ]
              Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

                People

                • Assignee:
                  bbendick Brandon Bendickson
                  Reporter:
                  robofjoy Robert Reid
                • Votes:
                  0 Vote for this issue
                  Watchers:
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                  Dates

                  • Created:
                    Updated:
                    Resolved: