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  1. IGB
  2. IGBF-4195

Add a Clear all button to Edit Tag and Color window

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: 10.2.0
        • Labels:
          None

          Description

          When a user uses the SAMtags feature in Color by for one genome and then switches genomes during the same session, the values added in the previous operation is retained. However, triggering a mechanism that clears the values when genomes are changed could be tricky to implement. A Clear All or Delete All button might be a good compromise for this if there's no way to detect when a genome's been changed.

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              relates to

              Task - A task that needs to be done. IGBF-4098 Fix Color by for Samtools to have persistent user input

              • Major - Major loss of function.
              • Closed

                Activity

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                karthik Karthik Raveendran created issue -
                karthik Karthik Raveendran made changes -
                Field Original Value New Value
                Epic Link IGBF-3765 [ 22984 ]
                karthik Karthik Raveendran made changes -
                Link This issue relates to IGBF-4098 [ IGBF-4098 ]
                nfreese Nowlan Freese made changes -
                Sprint Spring 7 [ 216 ] Spring 7, Spring 8 [ 216, 217 ]
                nfreese Nowlan Freese made changes -
                Rank Ranked higher
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                ann.loraine Ann Loraine made changes -
                Sprint Spring 7, Spring 8 [ 216, 217 ] Spring 7, Spring 8, Summer 1 [ 216, 217, 218 ]
                ann.loraine Ann Loraine made changes -
                Rank Ranked higher
                karthik Karthik Raveendran made changes -
                Status In Progress [ 3 ] To-Do [ 10305 ]
                sjagarap saideepthi jagarapu (Inactive) made changes -
                Link This issue is cloned by IGBF-4226 [ IGBF-4226 ]
                nfreese Nowlan Freese made changes -
                Link This issue is cloned by IGBF-4226 [ IGBF-4226 ]
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                karthik Karthik Raveendran added a comment -

                Implemented a clear button. See commit

                Show
                karthik Karthik Raveendran added a comment - Implemented a clear button. See commit
                karthik Karthik Raveendran made changes -
                Status To-Do [ 10305 ] In Progress [ 3 ]
                karthik Karthik Raveendran made changes -
                Status In Progress [ 3 ] Needs 1st Level Review [ 10005 ]
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                nfreese Nowlan Freese made changes -
                Assignee Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Status Needs 1st Level Review [ 10005 ] First Level Review in Progress [ 10301 ]
                Hide
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                pkulzer Paige Kulzer (Inactive) added a comment -

                Fetched Karthik's branch for testing on my Mac. The Clear all button appears to be working well, it removes all values from the table whether they were entered manually or via Import... I was able to Clear all values from the Color by table after switching genomes. No errors in the Log.

                Recommending PR!

                Show
                pkulzer Paige Kulzer (Inactive) added a comment - Fetched Karthik's branch for testing on my Mac. The Clear all button appears to be working well, it removes all values from the table whether they were entered manually or via Import... I was able to Clear all values from the Color by table after switching genomes. No errors in the Log. Recommending PR!
                pkulzer Paige Kulzer (Inactive) made changes -
                Status First Level Review in Progress [ 10301 ] Ready for Pull Request [ 10304 ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Assignee Paige Kulzer [ pkulzer ] Karthik Raveendran [ karthik ]
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                karthik Karthik Raveendran added a comment -

                PR Submitted: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/1078

                Show
                karthik Karthik Raveendran added a comment - PR Submitted: https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/1078
                karthik Karthik Raveendran made changes -
                Status Ready for Pull Request [ 10304 ] Pull Request Submitted [ 10101 ]
                karthik Karthik Raveendran made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                karthik Karthik Raveendran made changes -
                Status Reviewing Pull Request [ 10303 ] Pull Request Submitted [ 10101 ]
                karthik Karthik Raveendran made changes -
                Assignee Karthik Raveendran [ karthik ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Assignee Ann Loraine [ aloraine ]
                ann.loraine Ann Loraine made changes -
                Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
                Hide
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                ann.loraine Ann Loraine added a comment -

                PR is merged, new installers built and deployed to Early Access section of bioviz.org.

                Show
                ann.loraine Ann Loraine added a comment - PR is merged, new installers built and deployed to Early Access section of bioviz.org.
                ann.loraine Ann Loraine made changes -
                Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
                ann.loraine Ann Loraine made changes -
                Assignee Ann Loraine [ aloraine ]
                nfreese Nowlan Freese made changes -
                Assignee Paige Kulzer [ pkulzer ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
                Hide
                Permalink
                pkulzer Paige Kulzer (Inactive) added a comment -

                Tested on Mac, the Clear All button is working as expected. All values in the Color by table are removed after clicking this button. No errors in the Log.

                Closing this ticket!

                Show
                pkulzer Paige Kulzer (Inactive) added a comment - Tested on Mac, the Clear All button is working as expected. All values in the Color by table are removed after clicking this button. No errors in the Log. Closing this ticket!
                pkulzer Paige Kulzer (Inactive) made changes -
                Resolution Done [ 10000 ]
                Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Assignee Paige Kulzer [ pkulzer ] Karthik Raveendran [ karthik ]
                pkulzer Paige Kulzer (Inactive) made changes -
                Fix Version/s 10.2.0 [ 11100 ]

                  People

                  • Assignee:
                    karthik Karthik Raveendran
                    Reporter:
                    karthik Karthik Raveendran
                  • Votes:
                    0 Vote for this issue
                    Watchers:
                    3 Start watching this issue

                    Dates

                    • Created:
                      Updated:
                      Resolved: