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  1. IGB
  2. IGBF-4249

Pathview images according to Kelsey

    Details

    • Type: Task
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:
      None

      Description

      Make a series of pathview images with different LFC scales. For example, make +/-1, +/-2, +/-3, etc. Do this until the images get diluted and look awful. Do this for both the Ascorbate pathway and the Flavonoid path, but start with ascorbate. Also do the exact same thing, but with the DE genes only from deseq, I will attach those tables to this ticket.

        Attachments

          Activity

          bbendick Brandon Bendickson created issue -
          bbendick Brandon Bendickson made changes -
          Field Original Value New Value
          Epic Link IGBF-2993 [ 21429 ]
          bbendick Brandon Bendickson made changes -
          Attachment deseq_DE_genes_8hr.tsv [ 18732 ]
          Attachment deseq_DE_genes_3hr.tsv [ 18733 ]
          ghouck Gabby Houck (Inactive) made changes -
          Status To-Do [ 10305 ] In Progress [ 3 ]
          ghouck Gabby Houck (Inactive) made changes -
          Status In Progress [ 3 ] To-Do [ 10305 ]
          ghouck Gabby Houck (Inactive) made changes -
          Status To-Do [ 10305 ] Pull Request Submitted [ 10101 ]
          ghouck Gabby Houck (Inactive) made changes -
          Status Pull Request Submitted [ 10101 ] Reviewing Pull Request [ 10303 ]
          ghouck Gabby Houck (Inactive) made changes -
          Status Reviewing Pull Request [ 10303 ] Merged Needs Testing [ 10002 ]
          ghouck Gabby Houck (Inactive) made changes -
          Status Merged Needs Testing [ 10002 ] Post-merge Testing In Progress [ 10003 ]
          ghouck Gabby Houck (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Post-merge Testing In Progress [ 10003 ] Closed [ 6 ]

            People

            • Assignee:
              ghouck Gabby Houck (Inactive)
              Reporter:
              bbendick Brandon Bendickson
            • Votes:
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              Watchers:
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              Dates

              • Created:
                Updated:
                Resolved: