Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-4265

Re-run Kelseys Heatmaps

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Description

          GOAL: COntact Kelsey, get here heatmap code for all of her heatmaps.

          And then we can run as a double check.

          AND THEN, we use this code to insert clustering strategies once we have decided on what.....

            Attachments

              Activity

              Descending order - Click to sort in ascending order
              Hide
              Permalink
              robofjoy Robert Reid added a comment -

              Try other order as per Ravi's curosity.

              H25 M25 N25 T25 H37 M37 N37 T37

              Show
              robofjoy Robert Reid added a comment - Try other order as per Ravi's curosity. H25 M25 N25 T25 H37 M37 N37 T37
              Hide
              Permalink
              robofjoy Robert Reid added a comment -

              Kelsey shared her code in an email.

              The purpose was to apply a grouping of color to the heatmaps via clustering.
              HOWEVER:
              We are not changing the order of the experiments.
              We follow this order:
              H25 H37 M25 M37 N25 N37 T25 T37

              So no changing the x-axis. We can only change the Y.
              But we want the Tam @ 37 to be the most magenta.
              So maybe we just sort instead of cluster. Will try both ways.

              Show
              robofjoy Robert Reid added a comment - Kelsey shared her code in an email. The purpose was to apply a grouping of color to the heatmaps via clustering. HOWEVER: We are not changing the order of the experiments. We follow this order: H25 H37 M25 M37 N25 N37 T25 T37 So no changing the x-axis. We can only change the Y. But we want the Tam @ 37 to be the most magenta. So maybe we just sort instead of cluster. Will try both ways.

                People

                • Assignee:
                  bbendick Brandon Bendickson
                  Reporter:
                  robofjoy Robert Reid
                • Votes:
                  0 Vote for this issue
                  Watchers:
                  1 Start watching this issue

                  Dates

                  • Created:
                    Updated:
                    Resolved: