Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:None
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Story Points:5
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Epic Link:
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Sprint:Fall 5, Fall 6, Fall 7, Fall 8, Fall 9
Description
Situation: Dr. Loraine's students are working through an assignment that requires them to output a Seurat object. From there, Dr. Loraine would like for there to be a tutorial for her students to follow such that they can view that data in IGB.
Task: Create a tutorial that can walk a student through the process of visualizing Seurat data in IGB. This will include describing which file formats can be added to IGB, what is contained in the data they generated, and what they'll be seeing in IGB.
Link to working draft in Google Drive: https://docs.google.com/document/d/1bQrT4iKJERRAs5GAUvCnPWVrp4D-RiLzRlXt_BKtSuA/edit?usp=sharing
Attachments
Issue Links
- relates to
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IGBF-4340 Create python scripts to work with 10xGenomics files
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- To-Do
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Epic Link | IGBF-2809 [ 19325 ] |
| Description |
*Situation:* Dr. Loraine's students are working through an assignment that requires them to output a Seurat object. From there, Dr. Loraine would like for there to be a tutorial for her students to follow such that they can view that data in IGB.
*Task:* Create a tutorial that can walk a student through the process of visualizing Seurat data in IGB. This will include describing which file formats can be added to IGB, what is contained in the data they generated, and what they'll be seeing in IGB. |
*Situation:* Dr. Loraine's students are working through an assignment that requires them to output a Seurat object. From there, Dr. Loraine would like for there to be a tutorial for her students to follow such that they can view that data in IGB.
*Task:* Create a tutorial that can walk a student through the process of visualizing Seurat data in IGB. This will include describing which file formats can be added to IGB, what is contained in the data they generated, and what they'll be seeing in IGB. *Link to working draft in Google Drive:* https://docs.google.com/document/d/1bQrT4iKJERRAs5GAUvCnPWVrp4D-RiLzRlXt_BKtSuA/edit?usp=sharing |
| Status | To-Do [ 10305 ] | In Progress [ 3 ] |
| Rank | Ranked higher |
| Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
| Sprint | Fall 5 [ 228 ] | Fall 5, Fall 6 [ 228, 229 ] |
| Rank | Ranked higher |
| Sprint | Fall 5, Fall 6 [ 228, 229 ] | Fall 5, Fall 6, Fall 7 [ 228, 229, 230 ] |
| Rank | Ranked higher |
| Assignee | Paige Kulzer [ pkulzer ] |
| Sprint | Fall 5, Fall 6, Fall 7 [ 228, 229, 230 ] | Fall 5, Fall 6, Fall 7, Fall 8 [ 228, 229, 230, 231 ] |
| Rank | Ranked higher |
| Sprint | Fall 5, Fall 6, Fall 7, Fall 8 [ 228, 229, 230, 231 ] | Fall 5, Fall 6, Fall 7, Fall 8, Fall 9 [ 228, 229, 230, 231, 232 ] |
| Rank | Ranked higher |
| Assignee | Paige Kulzer [ pkulzer ] |
| Status | Needs 1st Level Review [ 10005 ] | First Level Review in Progress [ 10301 ] |
| Status | First Level Review in Progress [ 10301 ] | Ready for Pull Request [ 10304 ] |
| Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
| Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
| Status | Reviewing Pull Request [ 10303 ] | Merged Needs Testing [ 10002 ] |
| Status | Merged Needs Testing [ 10002 ] | Post-merge Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Post-merge Testing In Progress [ 10003 ] | Closed [ 6 ] |