Details
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Type:
Task
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 10.2.0
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Labels:None
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Story Points:3
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Epic Link:
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Sprint:Fall 8
Description
Situation: When loading a GFF in IGB that includes multiple FASTA sequences at the bottom of the file, IGB is adding each of the FASTA as a new chromosome/contig, but only the last chromosome/contig will correctly load the residues in IGB. The rest of the chromosome/contigs are not including the residues.
Task: Investigate and if possible fix it so that all of the chromosomes/contigs are able to load the residues.
To reproduce the issue:
- Start IGB
- Do not select a genome version
- Drag and drop the attached file (testFile.gff) into IGB (or select File > Open File...)
- Select chr3 and click Load Data - a gene model should appear and residues should appear in the Coordinates track
- Select chr2 and click Load Data - a gene model should appear, but no residues will be present in the Coordinates track
Attachments
Issue Links
- is blocked by
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- Closed
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