Uploaded image for project: 'IGB'
  1. IGB
  2. IGBF-4411

Add more SAMtags to SAMtags filter function

        Details

        • Type: Task
        • Status: Closed (View Workflow)
        • Priority: Major
        • Resolution: Done
        • Affects Version/s: None
        • Fix Version/s: None
        • Labels:
          None

          Attachments

            Issue Links

            is blocked by

            Bug - A problem which impairs or prevents the functions of the product. IGBF-4412 Fix issue with DAS test

            • Major - Major loss of function.
            • Closed

              Activity

              Descending order - Click to sort in ascending order
              Hide
              Permalink
              nfreese Nowlan Freese added a comment -

              Testing installer on Mac.

              • Color By SAMtag "AS" works with value of 90.
              • Color By typed in value "CIGAR" works with value of 5M286N85M
              • Filter By SAMtag "AS" works with value of 90 for equals or does not equal.
              • Filter By SAMtag "CY" works with value of FFFFFFFFFFFFFF,F for equals or does not equal.
              • Filter By SAMtag "CB" is case sensitive for a value of ATCACTTAGAGAGaAC-1

              No errors in the logs.

              Closing ticket.

              Show
              nfreese Nowlan Freese added a comment - Testing installer on Mac. Color By SAMtag "AS" works with value of 90. Color By typed in value "CIGAR" works with value of 5M286N85M Filter By SAMtag "AS" works with value of 90 for equals or does not equal. Filter By SAMtag "CY" works with value of FFFFFFFFFFFFFF,F for equals or does not equal. Filter By SAMtag "CB" is case sensitive for a value of ATCACTTAGAGAGaAC-1 No errors in the logs. Closing ticket.
              Hide
              Permalink
              aloraine Ann Loraine added a comment -

              Installers are built and deployed to bioviz.org early access section. Ready for final testing.

              Show
              aloraine Ann Loraine added a comment - Installers are built and deployed to bioviz.org early access section. Ready for final testing.
              Hide
              Permalink
              aloraine Ann Loraine added a comment -

              Thank you Karthik Raveendran!

              PR is merged and pipeline launched to build "installers for dev".

              Show
              aloraine Ann Loraine added a comment - Thank you Karthik Raveendran ! PR is merged and pipeline launched to build "installers for dev".
              Hide
              Permalink
              karthik Karthik Raveendran added a comment -

              Fix the code to make filter case sensitivity. See commit

              Show
              karthik Karthik Raveendran added a comment - Fix the code to make filter case sensitivity. See commit
              Hide
              Permalink
              karthik Karthik Raveendran added a comment -

              PR Submitted https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/1108

              Show
              karthik Karthik Raveendran added a comment - PR Submitted https://bitbucket.org/lorainelab/integrated-genome-browser/pull-requests/1108
              10 older comments

                People

                • Assignee:
                  karthik Karthik Raveendran
                  Reporter:
                  karthik Karthik Raveendran
                • Votes:
                  0 Vote for this issue
                  Watchers:
                  3 Start watching this issue

                  Dates

                  • Created:
                    Updated:
                    Resolved: