Details
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Type:
Improvement
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 8.5.0 Major Release
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Labels:
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Story Points:0.5
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Epic Link:
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Sprint:Sprint 29
Description
Cloud storage providers like Dropbox typically make it possible for users to create links to files and then share the links. However, paths exposed in links don't correspond to physical storage, which means that IGB can't make assumptions about the location of index files for BAM, tabix, or other indexed, random access formats.
Let's add a new optional attribute ("index") to the QuickLoad "file" tag where "index" indicates the location of the index file. Same rules about defining file locations should apply.
Attachments
Issue Links
- relates to
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REL-15 Create example BAM/BAI Quickloads
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- Testing Complete
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Activity
| Field | Original Value | New Value |
|---|---|---|
| Rank | Ranked higher |
| Rank | Ranked lower |
| Epic Link | IGBF-440 [ 15498 ] |
| Rank | Ranked lower |
| Rank | Ranked higher |
| Summary | new attribute for file tag | index attribute for file tag |
| Story Points | 0.5 |
| Summary | index attribute for file tag | index attribute for file tag in annots.xml |
| Sprint | Sprint 19 [ 24 ] |
| Rank | Ranked lower |
| Sprint | Sprint 19 [ 24 ] |
| Rank | Ranked higher |
| Rank | Ranked higher |
| Sprint | Sprint 27 [ 35 ] |
| Rank | Ranked lower |
| Assignee | David Norris [ dcnorris ] | John Eckstein [ jeckstein ] |
| Status | Open [ 1 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs Testing [ 10002 ] |
| Assignee | John Eckstein [ jeckstein ] | Mason Meyer [ mason ] |
| Status | Needs Testing [ 10002 ] | Testing In Progress [ 10003 ] |
| Assignee | Mason Meyer [ mason ] | John Eckstein [ jeckstein ] |
| Status | Testing In Progress [ 10003 ] | Open [ 1 ] |
| Sprint | Sprint 27 [ 35 ] |
| Sprint | Sprint 28 [ 36 ] |
| Rank | Ranked higher |
| Assignee | John Eckstein [ jeckstein ] | Tarun Mall [ tmall ] |
| Status | Open [ 1 ] | In Progress [ 3 ] |
| Status | In Progress [ 3 ] | Needs Testing [ 10002 ] |
| Status | Needs Testing [ 10002 ] | Pull Request Submitted [ 10101 ] |
| Sprint | Sprint 28 [ 36 ] |
| Sprint | Sprint 29 [ 37 ] |
| Rank | Ranked higher |
| Assignee | Tarun Mall [ tmall ] | John Eckstein [ jeckstein ] |
| Status | Pull Request Submitted [ 10101 ] | Needs Testing [ 10002 ] |
| Assignee | John Eckstein [ jeckstein ] | Mason Meyer [ mason ] |
| Status | Needs Testing [ 10002 ] | Testing In Progress [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Resolution | Done [ 10000 ] | |
| Status | Closed [ 6 ] | Open [ 1 ] |
| Fix Version/s | 8.5.0 Major Release [ 10003 ] |
| Resolution | Done [ 10000 ] | |
| Status | Open [ 1 ] | Closed [ 6 ] |
| Resolution | Done [ 10000 ] | |
| Status | Closed [ 6 ] | Open [ 1 ] |
| Labels | Data_Provider |
| Resolution | Done [ 10000 ] | |
| Status | Open [ 1 ] | Closed [ 6 ] |
| Workflow | Loraine Lab Workflow [ 15707 ] | Fall 2019 Workflow Update [ 19382 ] |
| Workflow | Fall 2019 Workflow Update [ 19382 ] | Revised Fall 2019 Workflow Update [ 21499 ] |