Details
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Type: Improvement
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Status: Closed (View Workflow)
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Priority: Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Labels:
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Story Points:1
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Sprint:Winter 2018 Sprint 3, Spring 2019 Sprint 1
Description
Several people have posted in Biostars about how they have had difficulty opening files in IGB (see https://www.biostars.org/p/107856/#136590 for an example). Ultimately the issue is not with IGB, but that the files do not match the correct standard. For example, there was no header information in a WIG file, or there was a BED file embedded inside of a WIG file.
However, if a file is an accepted format, but does not follow a standard format, the user is only told that IGB is "Unable to load data set for this file." In the future it may be helpful to the user to provide more information as to why the file was unable to load, i.e. no header/track line given, number of columns does not match accepted format, etc. This would allow the user to better diagnose the issue, and help keep them from immediately placing the fault on IGB.
Attachments
Issue Links
Activity
Field | Original Value | New Value |
---|---|---|
Epic Link | IGBF-501 [ 15563 ] |
Rank | Ranked higher |
Issue Type | New Feature [ 2 ] | Improvement [ 4 ] |
Assignee | David Norris [ dcnorris ] |
Rank | Ranked lower |
Epic Link | IGBF-594 [ 15667 ] |
Rank | Ranked higher |
Priority | Minor [ 4 ] | Major [ 3 ] |
Story Points | 1 | |
Sprint | Winter 2018 Sprint 3 [ 58 ] | |
Labels | Beginner |
Attachment | unableToLoad.png [ 14215 ] |
Attachment | brokenBed.bed [ 14216 ] | |
Attachment | unableToLoad.png [ 14217 ] | |
Attachment | workingBed.bed [ 14218 ] |
Attachment | unableToLoad.png [ 14217 ] |
Status | Open [ 1 ] | In Progress [ 3 ] |
Assignee | Sai Charan Reddy Vallapureddy [ svallapu ] |
Status | In Progress [ 3 ] | Needs 1st Level Review [ 10005 ] |
Assignee | Sai Charan Reddy Vallapureddy [ svallapu ] |
Status | Needs 1st Level Review [ 10005 ] | Reviewing [ 10301 ] |
Assignee | Nowlan Freese [ nfreese ] |
Assignee | Nowlan Freese [ nfreese ] | Sai Charan Reddy Vallapureddy [ svallapu ] |
Status | Reviewing [ 10301 ] | Ready for Pull Request [ 10304 ] |
Status | Ready for Pull Request [ 10304 ] | Pull Request Submitted [ 10101 ] |
Assignee | Sai Charan Reddy Vallapureddy [ svallapu ] |
Assignee | Sai Charan Reddy Vallapureddy [ svallapu ] |
Status | Pull Request Submitted [ 10101 ] | Reviewing Pull Request [ 10303 ] |
Assignee | Sai Charan Reddy Vallapureddy [ svallapu ] | Ann Loraine [ aloraine ] |
Rank | Ranked higher |
Sprint | Winter 2018 Sprint 3 [ 58 ] | Winter 2018 Sprint 3, Spring 2019 Sprint 1 [ 58, 59 ] |
Rank | Ranked higher |
Link | This issue relates to IGBF-1517 [ IGBF-1517 ] |
Status | Reviewing Pull Request [ 10303 ] | Needs Testing [ 10002 ] |
Assignee | Ann Loraine [ aloraine ] |
Rank | Ranked higher |
Status | Needs Testing [ 10002 ] | Testing In Progress [ 10003 ] |
Comment | [ Testing Windows: Works Correctly ] |
Comment |
[ Testing Windows: Working Correctly
Note: In the right click menu, the Get Info and Google menu options are unordered. This was not part of this issue, but would be related. A separate issue will be raised. ] |
Resolution | Done [ 10000 ] | |
Status | Testing In Progress [ 10003 ] | Closed [ 6 ] |
Assignee | Sai Charan Reddy Vallapureddy [ svallapu ] |
Workflow | Loraine Lab Workflow [ 15783 ] | Fall 2019 Workflow Update [ 19424 ] |
Workflow | Fall 2019 Workflow Update [ 19424 ] | Revised Fall 2019 Workflow Update [ 21541 ] |