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  1. IGB
  2. IGBF-673

Chromsomes may not be sorting correctly under the Current Genome Tab for D. rerio

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      It seems that chromosomes may not be sorting correctly under the current genome tab within the D. rerio genome.

      This genome has several unusual chromosomes with a title like "Zv9_scaffold3564". When the genome is opened this long list of unusual chromosomes is listed first and then the "Chr1, Chr2, etc." are listed at the bottom.

      This should be fixed so that "Chr1" is at the top of the list when the genome is selected, making it so that the genome opens to the first chromosome by default.

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            mason Mason Meyer (Inactive) added a comment -

            In the backlog grooming meeting it has been decided that by default, the order seen in the table in the Current Genome tab should first respect the contents of the genome.txt file.

            Sorting would not happen until clicking the heading of one of the titles at the top of the table (either sequence(s) or length).

            Ask Ann for clarification.

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            mason Mason Meyer (Inactive) added a comment - In the backlog grooming meeting it has been decided that by default, the order seen in the table in the Current Genome tab should first respect the contents of the genome.txt file. Sorting would not happen until clicking the heading of one of the titles at the top of the table (either sequence(s) or length). Ask Ann for clarification.
            Hide
            mason Mason Meyer (Inactive) added a comment -

            My testing confirms that the current genome tab is now ordering chromosomes based on the order of the genome.txt files. Since this story is resolved it will now be closed.

            Show
            mason Mason Meyer (Inactive) added a comment - My testing confirms that the current genome tab is now ordering chromosomes based on the order of the genome.txt files. Since this story is resolved it will now be closed.

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              • Assignee:
                mason Mason Meyer (Inactive)
                Reporter:
                mason Mason Meyer (Inactive)
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                  Updated:
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