Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Major
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 8.4.0 Major Release
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Labels:None
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Story Points:0.25
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Epic Link:
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Sprint:Sprint 21
Description
While testing I noticed that performing the "Sqrt" track operation now generates a null pointer exception (see below). This was not happening a few weeks ago during my last round of testing graph track operations.
12:09:06.054 INFO c.a.igb.view.load.GeneralLoadUtils - Loaded Blueberry genes in 10.87 s
Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at com.affymetrix.igb.shared.TrackFunctionOperationA.getOperatorParam(TrackFunctionOperationA.java:127)
at com.affymetrix.igb.shared.TrackFunctionOperationA.getMethod(TrackFunctionOperationA.java:99)
at com.affymetrix.igb.shared.TrackFunctionOperationA.addTier(TrackFunctionOperationA.java:83)
at com.affymetrix.igb.shared.TrackOperationAction.actionPerformed(TrackOperationAction.java:16)
at com.affymetrix.igb.action.TrackOperationMenuItemAction.actionPerformed(TrackOperationMenuItemAction.java:69)
at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
at javax.swing.AbstractButton.doClick(Unknown Source)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(Unknown Source)
at java.awt.Component.processMouseEvent(Unknown Source)
at javax.swing.JComponent.processMouseEvent(Unknown Source)
at java.awt.Component.processEvent(Unknown Source)
at java.awt.Container.processEvent(Unknown Source)
at java.awt.Component.dispatchEventImpl(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Window.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
at java.awt.EventQueue.access$500(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
Attachments
Activity
My testing confirms that this issue has been resolved so it will now be closed.
I don't know yet, but it seems likely to me this is linked to the work done by Tarun on graph track names adding attribute values. Lets assign it to him to resolve since he should be familiar with this code.