Details
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Type:
Bug
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Status: Closed (View Workflow)
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Priority:
Minor
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: 8.4.1 Minor Release
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Labels:None
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Sprint:Sprint 23
Description
Works in 8.3 not 8.4
Affects IGBQuickLoad main species.txt file: http://igbquickload.org/quickload/species.txt
Note that first column no longer being used to populate Species menu in Current Genome tab.
For testing, add this QL URL:
https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload
Or download as a tarball:
https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload.tar.gz
Also, see documentation here:
Read documentation for details on how species.txt is used.
Attachments
Activity
| Field | Original Value | New Value |
|---|---|---|
| Rank | Ranked higher |
| Fix Version/s | 8.4.1 Minor Release [ 10002 ] |
| Description |
Works in 8.3 not not 8.4
To try it, see Y_lipolytical_clib in Species menu in 8.4. To test, download & unpack this tarball to your local computer. Will provide link soon. |
Works in 8.3 not 8.4
Affects IGBQuickLoad main species.txt file: http://igbquickload.org/quickload/species.txt Note that first column no longer being used to populate Species menu in Current Genome tab. For testing, add this QL URL: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload Also, can download this as a "tarball" from: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload.tar.gz |
| Description |
Works in 8.3 not 8.4
Affects IGBQuickLoad main species.txt file: http://igbquickload.org/quickload/species.txt Note that first column no longer being used to populate Species menu in Current Genome tab. For testing, add this QL URL: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload Also, can download this as a "tarball" from: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload.tar.gz |
Works in 8.3 not 8.4
Affects IGBQuickLoad main species.txt file: http://igbquickload.org/quickload/species.txt Note that first column no longer being used to populate Species menu in Current Genome tab. For testing, add this QL URL: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload Or download as a tarball: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload.tar.gz |
| Description |
Works in 8.3 not 8.4
Affects IGBQuickLoad main species.txt file: http://igbquickload.org/quickload/species.txt Note that first column no longer being used to populate Species menu in Current Genome tab. For testing, add this QL URL: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload Or download as a tarball: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload.tar.gz |
Works in 8.3 not 8.4
Affects IGBQuickLoad main species.txt file: http://igbquickload.org/quickload/species.txt Note that first column no longer being used to populate Species menu in Current Genome tab. For testing, add this QL URL: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload Or download as a tarball: https://dl.dropboxusercontent.com/u/15094167/UnicornQuickload.tar.gz Also, see documentation here: https://wiki.transvar.org/display/igbman/Sharing+data+for+a+custom+genome+not+already+part+of+IGB+QuickLoad Read documentation for details on how species.txt is used. |
| Attachment | igb8.3.png [ 13116 ] | |
| Attachment | igb8.4.png [ 13117 ] |
| Sprint | Backlog Grooming Meeting [ 30 ] |
| Rank | Ranked higher |
| Priority | Major [ 3 ] | Minor [ 4 ] |
| Sprint | Backlog Grooming Meeting [ 30 ] | Sprint 22 [ 29 ] |
| Status | Open [ 1 ] | Needs Testing [ 10002 ] |
| Sprint | Sprint 22 [ 29 ] |
| Sprint | Sprint 23 [ 30 ] |
| Rank | Ranked higher |
| Assignee | David Norris [ dcnorris ] | Mason Meyer [ mason ] |
| Status | Needs Testing [ 10002 ] | Testing In Progress [ 10003 ] |
| Summary | species.txt no longer being used to add new species to Species menu | wrong column in species.txt used for species combobox |
My testing verifies that this issue is resolved so it will now be closed.
| Resolution | Done [ 10000 ] | |
| Status | Testing In Progress [ 10003 ] | Closed [ 6 ] |
| Workflow | Loraine Lab Workflow [ 16092 ] | Fall 2019 Workflow Update [ 19573 ] |
| Workflow | Fall 2019 Workflow Update [ 19573 ] | Revised Fall 2019 Workflow Update [ 21692 ] |
fixed on igb_8_5