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  1. IGB
  2. IGBF-878

Some genomes' models will not start in ProtAnnot

    Details

    • Type: Bug
    • Status: Closed (View Workflow)
    • Priority: Major
    • Resolution: Done
    • Affects Version/s: None
    • Fix Version/s: None
    • Labels:

      Description

      While testing I noticed that some genomes' gene models will not start in Prot Annot (the message saying that no gene model is selected appears.)

      To reproduce:

      1) Go to a genome containing such as Saccharomyces cerevisiae, Bos taurus, or Tribolium castaneum and try to start ProtAnnot for a gene model.

      *Observe:
      ProtAnnot thinks that no gene model has been selected.

        Attachments

          Activity

          mason Mason Meyer (Inactive) created issue -
          mason Mason Meyer (Inactive) made changes -
          Field Original Value New Value
          Epic Link IGBF-439 [ 15497 ]
          mason Mason Meyer (Inactive) made changes -
          Summary GFF files will not start in ProtAnnot Some genome's models will not start in ProtAnnot
          mason Mason Meyer (Inactive) made changes -
          Description While testing I noticed that GFF gene models are will not start in Prot Annot (the message saying that no gene model is selected appears.)

          To reproduce:

          1) Go to a genome containing GFF gene models, (such as Saccharomyces cerevisiae or Bos taurus) and try to start ProtAnnot for a gene model.

          *Observe:
          ProtAnnot thinks that no gene model has been selected.
          While testing I noticed that some genome's gene models will not start in Prot Annot (the message saying that no gene model is selected appears.)

          To reproduce:

          1) Go to a genome containing such as Saccharomyces cerevisiae or Bos taurus and try to start ProtAnnot for a gene model.

          *Observe:
          ProtAnnot thinks that no gene model has been selected.
          mason Mason Meyer (Inactive) made changes -
          Description While testing I noticed that some genome's gene models will not start in Prot Annot (the message saying that no gene model is selected appears.)

          To reproduce:

          1) Go to a genome containing such as Saccharomyces cerevisiae or Bos taurus and try to start ProtAnnot for a gene model.

          *Observe:
          ProtAnnot thinks that no gene model has been selected.
          While testing I noticed that some genome's gene models will not start in Prot Annot (the message saying that no gene model is selected appears.)

          To reproduce:

          1) Go to a genome containing such as Saccharomyces cerevisiae, Bos taurus, or Tribolium castaneum and try to start ProtAnnot for a gene model.

          *Observe:
          ProtAnnot thinks that no gene model has been selected.
          mason Mason Meyer (Inactive) made changes -
          Description While testing I noticed that some genome's gene models will not start in Prot Annot (the message saying that no gene model is selected appears.)

          To reproduce:

          1) Go to a genome containing such as Saccharomyces cerevisiae, Bos taurus, or Tribolium castaneum and try to start ProtAnnot for a gene model.

          *Observe:
          ProtAnnot thinks that no gene model has been selected.
          While testing I noticed that some genomes' gene models will not start in Prot Annot (the message saying that no gene model is selected appears.)

          To reproduce:

          1) Go to a genome containing such as Saccharomyces cerevisiae, Bos taurus, or Tribolium castaneum and try to start ProtAnnot for a gene model.

          *Observe:
          ProtAnnot thinks that no gene model has been selected.
          mason Mason Meyer (Inactive) made changes -
          Summary Some genome's models will not start in ProtAnnot Some genomes' models will not start in ProtAnnot
          tmall Tarun Mall (Inactive) made changes -
          Status Open [ 1 ] In Progress [ 3 ]
          tmall Tarun Mall (Inactive) made changes -
          Status In Progress [ 3 ] Pull Request Submitted [ 10101 ]
          tmall Tarun Mall (Inactive) made changes -
          Status Pull Request Submitted [ 10101 ] Needs Testing [ 10002 ]
          mason Mason Meyer (Inactive) made changes -
          Status Needs Testing [ 10002 ] Testing In Progress [ 10003 ]
          mason Mason Meyer (Inactive) made changes -
          Assignee Tarun Mall [ tmall ] Mason Meyer [ mason ]
          mason Mason Meyer (Inactive) made changes -
          Rank Ranked higher
          mason Mason Meyer (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Testing In Progress [ 10003 ] Closed [ 6 ]
          jeckstein John Eckstein (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Closed [ 6 ] Open [ 1 ]
          jeckstein John Eckstein (Inactive) made changes -
          Labels ProtAnnot
          jeckstein John Eckstein (Inactive) made changes -
          Resolution Done [ 10000 ]
          Status Open [ 1 ] Closed [ 6 ]
          ann.loraine Ann Loraine made changes -
          Workflow Loraine Lab Workflow [ 16288 ] Fall 2019 Workflow Update [ 19617 ]
          ann.loraine Ann Loraine made changes -
          Workflow Fall 2019 Workflow Update [ 19617 ] Revised Fall 2019 Workflow Update [ 21736 ]

            People

            • Assignee:
              mason Mason Meyer (Inactive)
              Reporter:
              mason Mason Meyer (Inactive)
            • Votes:
              0 Vote for this issue
              Watchers:
              1 Start watching this issue

              Dates

              • Created:
                Updated:
                Resolved: