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  1. IGB
  2. IGBF-915

IGB returns to default chromosome after removing any track. (local files only)

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          Found by Ivory:

          By default IGB goes to the first chromosome in the genome. I go the chloroplast chromosome and add a couple bed files to view. load data, all is well. I remove one of my bed files (using x in data table). The track disappears (good) and IGB moves back to the first chromosome (bad).
          I found this while working in the tomato genome.
          This happens consistently when I use local files (added via drag and drop). I think I got it to happen once with the same files loaded through local quickload, but I tried several times to make it happen again with the quickload and it never did.

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              mason Mason Meyer (Inactive) created issue -
              mason Mason Meyer (Inactive) made changes -
              Field Original Value New Value
              Epic Link IGBF-439 [ 15497 ]
              mason Mason Meyer (Inactive) made changes -
              Rank Ranked higher
              dcnorris David Norris (Inactive) made changes -
              Status Open [ 1 ] In Progress [ 3 ]
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              dcnorris David Norris (Inactive) added a comment -

              fixed on igb_8_5 and merged to master

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              dcnorris David Norris (Inactive) added a comment - fixed on igb_8_5 and merged to master
              dcnorris David Norris (Inactive) made changes -
              Status In Progress [ 3 ] Needs Testing [ 10002 ]
              jeckstein John Eckstein (Inactive) made changes -
              Labels Track_View
              mason Mason Meyer (Inactive) made changes -
              Status Needs Testing [ 10002 ] Testing In Progress [ 10003 ]
              mason Mason Meyer (Inactive) made changes -
              Assignee David Norris [ dcnorris ] Mason Meyer [ mason ]
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              mason Mason Meyer (Inactive) added a comment - - edited

              I tested this issue on 8.4.3 and 8.5.0 by checking to see if IGB jumped back to Chr1 when deleting a local track from a different chromosome.

              I tested the delete action using the red X under the data management table, the option under a track context menu, and the option under the file menu.

              I also bookmarked a location on a chromosome other than chromosome 1, restarted IGB, and tried to delete a local track to see if session restart affected anything.

              This issue is now functioning as expected on 8.4.3 but still needs to be tested on 8.5.0.

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              mason Mason Meyer (Inactive) added a comment - - edited I tested this issue on 8.4.3 and 8.5.0 by checking to see if IGB jumped back to Chr1 when deleting a local track from a different chromosome. I tested the delete action using the red X under the data management table, the option under a track context menu, and the option under the file menu. I also bookmarked a location on a chromosome other than chromosome 1, restarted IGB, and tried to delete a local track to see if session restart affected anything. This issue is now functioning as expected on 8.4.3 but still needs to be tested on 8.5.0.
              mason Mason Meyer (Inactive) made changes -
              Resolution Done [ 10000 ]
              Status Testing In Progress [ 10003 ] Closed [ 6 ]
              mason Mason Meyer (Inactive) made changes -
              Resolution Done [ 10000 ]
              Status Closed [ 6 ] Open [ 1 ]
              mason Mason Meyer (Inactive) made changes -
              Status Open [ 1 ] Needs Testing [ 10002 ]
              mason Mason Meyer (Inactive) made changes -
              Assignee Mason Meyer [ mason ]
              mason Mason Meyer (Inactive) made changes -
              Rank Ranked lower
              mason Mason Meyer (Inactive) made changes -
              Resolution Done [ 10000 ]
              Status Needs Testing [ 10002 ] Closed [ 6 ]
              ann.loraine Ann Loraine made changes -
              Workflow Loraine Lab Workflow [ 16327 ] Fall 2019 Workflow Update [ 19644 ]
              ann.loraine Ann Loraine made changes -
              Workflow Fall 2019 Workflow Update [ 19644 ] Revised Fall 2019 Workflow Update [ 21763 ]

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                  Reporter:
                  mason Mason Meyer (Inactive)
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                    Updated:
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